Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.59041
2700097O09Rik
RIKEN cDNA 2700097O09 gene
12
72658
Gene Ontology
extracellular space
|
methyltransferase activity
|
transferase activity
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 39 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
CCTTTAATCC (
355
)
52.2
0.0522
Cb medulloblastoma
CCTTTAATCC (
355
)
41.6
0.0416
P8 GC+1d culture
CCTTTAATCC (
355
)
32
0.032
P8 GC+1d culture
ACCGTGTGCC
(
2
)
2.3
0.0023
P8 GC+SHH+1d culture
CCTTTAATCC (
355
)
25.8
0.0258
P8 GC+SHH+1d culture
ACCGTGTGCC
(
2
)
1.2
0.0012
P8 GC+SHH+1d culture
GATGTGTGTG (
5
)
1.2
0.0012
3T3 fibroblasts
CCTTTAATCC (
355
)
70.1
0.0701
E15 cortex
CCTTTAATCC (
355
)
54.4
0.0544
E15 cortex
ACCGTGTGCC
(
2
)
4.9
0.0049
P1 cortex
CCTTTAATCC (
355
)
154.5
0.1545
Hypothalamus
CCTTTAATCC (
355
)
19.9
0.0199
Hypothalamus
GATGTGTGTG (
5
)
1.8
0.0018
E12.5 retina
CCTTTAATCC (
355
)
75.1
0.0751
E12.5 retina
ACCGTGTGCC
(
2
)
3.8
0.0038
E14.5 retina
CCTTTAATCC (
355
)
120.3
0.1203
E14.5 retina
ACCGTGTGCC
(
2
)
1.8
0.0018
E16.5 retina
CCTTTAATCC (
355
)
68.8
0.0688
E16.5 retina
ACCGTGTGCC
(
2
)
10.9
0.0109
E18.5 retina
CCTTTAATCC (
355
)
23.6
0.0236
E18.5 retina
GATGTGTGTG (
5
)
3.6
0.0036
E18.5 retina
ACCGTGTGCC
(
2
)
1.8
0.0018
P0.5 retina
CCTTTAATCC (
355
)
72.6
0.0726
P0.5 retina
GATGTGTGTG (
5
)
2
0.002
P2.5 retina
CCTTTAATCC (
355
)
70.4
0.0704
P2.5 retina
ACCGTGTGCC
(
2
)
1.8
0.0018
P4.5 retina
CCTTTAATCC (
355
)
43.6
0.0436
P6.5 retina
CCTTTAATCC (
355
)
70
0.07
P6.5 retina
ACCGTGTGCC
(
2
)
3.3
0.0033
P6.5 retina
GATGTGTGTG (
5
)
1.7
0.0017
P6.5 retina
TTGAAAAACA (
9
)
1.7
0.0017
P10.5 crx- retina
CCTTTAATCC (
355
)
63.2
0.0632
P10.5 crx- retina
ACCGTGTGCC
(
2
)
7.4
0.0074
P10.5 crx- retina
GATGTGTGTG (
5
)
3.7
0.0037
P10.5 crx+ retina
CCTTTAATCC (
355
)
38.4
0.0384
P10.5 crx+ retina
ACCGTGTGCC
(
2
)
1.9
0.0019
Adult retinal
CCTTTAATCC (
355
)
129.6
0.1296
ONL
CCTTTAATCC (
355
)
84.3
0.0843
ONL
TTGAAAAACA (
9
)
3.8
0.0038
