Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.60720
4930512K17Rik
RIKEN cDNA 4930512K17 gene
10
75092
Mm.60720
Btbd2
BTB (POZ) domain containing 2
10
208198
Gene Ontology
protein binding
Human Homolog
BTBD2[BTB (POZ) domain containing 2]
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 69 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
GGAGGTGTGC
(
3
)
9.8
0.0098
P8 Cb GC
TTCAATGGTG
(
4
)
8.2
0.0082
P8 Cb GC
GCTTTGGGAT (
4
)
1.6
0.0016
Cb medulloblastoma
GGAGGTGTGC
(
3
)
13.9
0.0139
Cb medulloblastoma
TTCAATGGTG
(
4
)
2.3
0.0023
P8 GC+1d culture
GGAGGTGTGC
(
3
)
12.6
0.0126
P8 GC+1d culture
GCTTTGGGAT (
4
)
3.4
0.0034
P8 GC+1d culture
TTCAATGGTG
(
4
)
2.3
0.0023
P8 GC+SHH+1d culture
GGAGGTGTGC
(
3
)
14.1
0.0141
P8 GC+SHH+1d culture
GCTTTGGGAT (
4
)
5.9
0.0059
P8 GC+SHH+1d culture
TTCAATGGTG
(
4
)
5.9
0.0059
3T3 fibroblasts
GCTTTGGGAT (
4
)
10.5
0.0105
3T3 fibroblasts
TTCAATGGTG
(
4
)
7
0.007
3T3 fibroblasts
GGAGGTGTGC
(
3
)
3.5
0.0035
E15 cortex
GGAGGTGTGC
(
3
)
19.8
0.0198
E15 cortex
GAAGGGGCTG
(
4
)
4.9
0.0049
Hypothalamus
GGAGGTGTGC
(
3
)
9.1
0.0091
Hypothalamus
TTCAATGGTG
(
4
)
5.4
0.0054
Hypothalamus
GGCTGGGCCC (
6
)
1.8
0.0018
Hypothalamus
GGTTGGGGAT (
3
)
1.8
0.0018
Hypothalamus
TGGCCGTGGT
(
3
)
1.8
0.0018
E12.5 retina
TTCAATGGTG
(
4
)
18.8
0.0188
E12.5 retina
GCTTTGGGAT (
4
)
9.4
0.0094
E12.5 retina
GGAGGTGTGC
(
3
)
7.5
0.0075
E12.5 retina
GGTTGGGGAT (
3
)
1.9
0.0019
E14.5 retina
TTCAATGGTG
(
4
)
14.6
0.0146
E14.5 retina
GCTTTGGGAT (
4
)
3.6
0.0036
E14.5 retina
GGAGGTGTGC
(
3
)
3.6
0.0036
E14.5 retina
GGTTGGGGAT (
3
)
3.6
0.0036
E16.5 retina
TTCAATGGTG
(
4
)
29
0.029
E16.5 retina
GGAGGTGTGC
(
3
)
10.9
0.0109
E16.5 retina
TGGCCGTGGT
(
3
)
3.6
0.0036
E16.5 retina
GGCTGGGCCC (
6
)
1.8
0.0018
E18.5 retina
TTCAATGGTG
(
4
)
10.9
0.0109
E18.5 retina
GCTTTGGGAT (
4
)
9.1
0.0091
E18.5 retina
GGAGGTGTGC
(
3
)
9.1
0.0091
E18.5 retina
GGTTGGGGAT (
3
)
3.6
0.0036
P0.5 retina
TTCAATGGTG
(
4
)
15.7
0.0157
P0.5 retina
GGAGGTGTGC
(
3
)
9.8
0.0098
P0.5 retina
GCTTTGGGAT (
4
)
2
0.002
P2.5 retina
GGAGGTGTGC
(
3
)
22.9
0.0229
P2.5 retina
TTCAATGGTG
(
4
)
12.3
0.0123
P2.5 retina
GCTTTGGGAT (
4
)
7
0.007
P4.5 retina
GGAGGTGTGC
(
3
)
27.7
0.0277
P4.5 retina
GCTTTGGGAT (
4
)
5.9
0.0059
P4.5 retina
TTCAATGGTG
(
4
)
5.9
0.0059
P4.5 retina
GGCTGGGCCC (
6
)
2
0.002
P6.5 retina
GGAGGTGTGC
(
3
)
15
0.015
P6.5 retina
GCTTTGGGAT (
4
)
11.7
0.0117
P6.5 retina
GGGAGGCAGG (
6
)
3.3
0.0033
P6.5 retina
TTCAATGGTG
(
4
)
3.3
0.0033
P10.5 crx- retina
GGAGGTGTGC
(
3
)
20.4
0.0204
P10.5 crx- retina
TTCAATGGTG
(
4
)
5.6
0.0056
P10.5 crx- retina
GCTTTGGGAT (
4
)
3.7
0.0037
P10.5 crx- retina
GAAGGGGCTG
(
4
)
1.9
0.0019
P10.5 crx- retina
GGGAGGCAGG (
6
)
1.9
0.0019
P10.5 crx+ retina
GGAGGTGTGC
(
3
)
34.6
0.0346
P10.5 crx+ retina
GCTTTGGGAT (
4
)
9.6
0.0096
P10.5 crx+ retina
GGCTGGGCCC (
6
)
1.9
0.0019
P10.5 crx+ retina
TTCAATGGTG
(
4
)
1.9
0.0019
Adult retinal
GGAGGTGTGC
(
3
)
13
0.013
Adult retinal
TTCAATGGTG
(
4
)
7.4
0.0074
Adult retinal
GCTTTGGGAT (
4
)
3.7
0.0037
ONL
GGAGGTGTGC
(
3
)
7.7
0.0077
ONL
GGTTGGGGAT (
3
)
3.8
0.0038
ONL
TTCAATGGTG
(
4
)
3.8
0.0038
ONL
GAAGGGGCTG
(
4
)
1.9
0.0019
ONL
GCTTTGGGAT (
4
)
1.9
0.0019
ONL
GGGAGGCAGG (
6
)
1.9
0.0019
