Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.6276	U2af1-rs2	U2 small nuclear ribonucleoprotein auxiliary factor (U2AF) 1, related sequence 2	X	X 68.5 cM	22184
Mm.6276	A230052C13Rik	RIKEN cDNA A230052C13 gene	X		368205
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 31 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC ATACTTTTCA (7) 1.6 0.0016 P8 Cb GC CACAGCTCAA (3) 1.6 0.0016 Cb medulloblastoma ATCAGAATAT (4) 2.3 0.0023 Cb medulloblastoma CACAGCTCAA (3) 2.3 0.0023 P8 GC+1d culture ATACTTTTCA (7) 2.3 0.0023 P8 GC+1d culture CACAGCTCAA (3) 2.3 0.0023 P8 GC+1d culture GGGGTGAGGA (4) 1.1 0.0011 P8 GC+SHH+1d culture CACAGCTCAA (3) 2.3 0.0023 P8 GC+SHH+1d culture ATCAGAATAT (4) 1.2 0.0012 P8 GC+SHH+1d culture GGGGTGAGGA (4) 1.2 0.0012 P1 cortex AAGAATGGTT (4) 9.1 0.0091 P1 cortex CACAGCTCAA (3) 4.5 0.0045 P1 cortex TATATGAATG (2) 4.5 0.0045 Hypothalamus CACAGCTCAA (3) 9.1 0.0091 Hypothalamus AAGAATGGTT (4) 3.6 0.0036 E12.5 retina GGGGTGAGGA (4) 1.9 0.0019 E16.5 retina TATATGAATG (2) 1.8 0.0018 E18.5 retina AAGAATGGTT (4) 1.8 0.0018 E18.5 retina CACAGCTCAA (3) 1.8 0.0018 E18.5 retina TCTGTTCATT (2) 1.8 0.0018 P2.5 retina ATCAGAATAT (4) 1.8 0.0018 P2.5 retina CACAGCTCAA (3) 1.8 0.0018 P2.5 retina TATATGAATG (2) 1.8 0.0018 P2.5 retina TCTGTTCATT (2) 1.8 0.0018 P4.5 retina TATATGAATG (2) 2 0.002 P6.5 retina TCTGTTCATT (2) 1.7 0.0017 P10.5 crx- retina TATATGAATG (2) 1.9 0.0019 P10.5 crx+ retina CACAGCTCAA (3) 3.8 0.0038 ONL ATCAGAATAT (4) 3.8 0.0038 ONL AAGAATGGTT (4) 1.9 0.0019 ONL CACAGCTCAA (3) 1.9 0.0019