Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.62876
Zwint
ZW10 interactor
10
10 38.0 cM
52696
Mm.62876
2610034E01Rik
RIKEN cDNA 2610034E01 gene
10
69236
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 66 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
CCTTTGTGAC
(
3
)
11.4
0.0114
P8 Cb GC
TATACAAAGT (
4
)
3.3
0.0033
Cb medulloblastoma
CCTTTGTGAC
(
3
)
34.7
0.0347
Cb medulloblastoma
AGTGCTGGGA (
4
)
2.3
0.0023
Cb medulloblastoma
CACGCACACA (
9
)
2.3
0.0023
Cb medulloblastoma
CCACAACCAC
(
3
)
2.3
0.0023
Cb medulloblastoma
TATACAAAGT (
4
)
2.3
0.0023
P8 GC+1d culture
CCTTTGTGAC
(
3
)
17.1
0.0171
P8 GC+1d culture
GATATGGACT
(
2
)
3.4
0.0034
P8 GC+1d culture
ACTGTGGTTT (
3
)
2.3
0.0023
P8 GC+1d culture
GATTCACATT (
2
)
1.1
0.0011
P8 GC+SHH+1d culture
CCTTTGTGAC
(
3
)
16.4
0.0164
P8 GC+SHH+1d culture
GATATGGACT
(
2
)
3.5
0.0035
P8 GC+SHH+1d culture
ACTGTGGTTT (
3
)
1.2
0.0012
P8 GC+SHH+1d culture
CACGCACACA (
9
)
1.2
0.0012
P8 GC+SHH+1d culture
GATTCACATT (
2
)
1.2
0.0012
P8 GC+SHH+1d culture
TATACAAAGT (
4
)
1.2
0.0012
3T3 fibroblasts
CCTTTGTGAC
(
3
)
7
0.007
E15 cortex
CCTTTGTGAC
(
3
)
4.9
0.0049
E15 cortex
GATATGGACT
(
2
)
4.9
0.0049
P1 cortex
CCTTTGTGAC
(
3
)
13.6
0.0136
Hypothalamus
CCTTTGTGAC
(
3
)
48.9
0.0489
Hypothalamus
CCACAACCAC
(
3
)
10.9
0.0109
Hypothalamus
TATACAAAGT (
4
)
9.1
0.0091
Hypothalamus
GATTCACATT (
2
)
7.2
0.0072
Hypothalamus
CACGCACACA (
9
)
3.6
0.0036
E12.5 retina
TATACAAAGT (
4
)
15
0.015
E12.5 retina
CCTTTGTGAC
(
3
)
11.3
0.0113
E12.5 retina
GATATGGACT
(
2
)
5.6
0.0056
E14.5 retina
TATACAAAGT (
4
)
12.8
0.0128
E14.5 retina
CCTTTGTGAC
(
3
)
10.9
0.0109
E14.5 retina
GATATGGACT
(
2
)
3.6
0.0036
E14.5 retina
AGTGCTGGGA (
4
)
1.8
0.0018
E14.5 retina
GATTCACATT (
2
)
1.8
0.0018
E16.5 retina
CCTTTGTGAC
(
3
)
21.7
0.0217
E16.5 retina
GATATGGACT
(
2
)
3.6
0.0036
E16.5 retina
TATACAAAGT (
4
)
3.6
0.0036
E16.5 retina
CCACAACCAC
(
3
)
1.8
0.0018
E18.5 retina
TATACAAAGT (
4
)
14.6
0.0146
E18.5 retina
GATATGGACT
(
2
)
9.1
0.0091
E18.5 retina
GATTCACATT (
2
)
3.6
0.0036
E18.5 retina
CACGCACACA (
9
)
1.8
0.0018
P0.5 retina
CCTTTGTGAC
(
3
)
21.6
0.0216
P0.5 retina
GATATGGACT
(
2
)
3.9
0.0039
P0.5 retina
CCACAACCAC
(
3
)
2
0.002
P2.5 retina
CCTTTGTGAC
(
3
)
15.8
0.0158
P2.5 retina
GATATGGACT
(
2
)
3.5
0.0035
P2.5 retina
TATACAAAGT (
4
)
3.5
0.0035
P2.5 retina
CCACAACCAC
(
3
)
1.8
0.0018
P4.5 retina
CCTTTGTGAC
(
3
)
11.9
0.0119
P4.5 retina
TATACAAAGT (
4
)
7.9
0.0079
P6.5 retina
CCTTTGTGAC
(
3
)
15
0.015
P10.5 crx- retina
CCTTTGTGAC
(
3
)
52
0.052
P10.5 crx- retina
CACGCACACA (
9
)
1.9
0.0019
P10.5 crx- retina
GATATGGACT
(
2
)
1.9
0.0019
P10.5 crx- retina
TATACAAAGT (
4
)
1.9
0.0019
P10.5 crx+ retina
CCTTTGTGAC
(
3
)
30.8
0.0308
P10.5 crx+ retina
TATACAAAGT (
4
)
7.7
0.0077
P10.5 crx+ retina
GATTCACATT (
2
)
1.9
0.0019
Adult retinal
CCTTTGTGAC
(
3
)
29.6
0.0296
Adult retinal
AGTGCTGGGA (
4
)
1.9
0.0019
Adult retinal
GATTCACATT (
2
)
1.9
0.0019
Adult retinal
TATACAAAGT (
4
)
1.9
0.0019
ONL
CCTTTGTGAC
(
3
)
3.8
0.0038
ONL
GATATGGACT
(
2
)
1.9
0.0019
ONL
GATTCACATT (
2
)
1.9
0.0019
