Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.63068	Ss18l1	synovial sarcoma translocation gene on chromosome 18-like 1	2		269397
Gene Ontology	dendrite morphogenesis | DNA binding | protein binding | regulation of transcription, DNA-dependent | transcription factor activity
Human Homolog	SS18L1[synovial sarcoma translocation gene on chromosome 18-like 1]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 33 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC CACCACCACA (14) 55.5 0.0555 P8 Cb GC AATGTTTGAA (10) 1.6 0.0016 P8 Cb GC ATGGTAAATG (2) 1.6 0.0016 P8 Cb GC ATTCCGAATT (107) 1.6 0.0016 Cb medulloblastoma CACCACCACA (14) 9.2 0.0092 P8 GC+1d culture CACCACCACA (14) 50.2 0.0502 P8 GC+SHH+1d culture CACCACCACA (14) 30.4 0.0304 3T3 fibroblasts CACCACCACA (14) 287.4 0.2874 E15 cortex CACCACCACA (14) 34.6 0.0346 P1 cortex CACCACCACA (14) 27.3 0.0273 P1 cortex AATGTTTGAA (10) 9.1 0.0091 Hypothalamus CACCACCACA (14) 18.1 0.0181 E12.5 retina CACCACCACA (14) 41.3 0.0413 E14.5 retina CACCACCACA (14) 9.1 0.0091 E16.5 retina CACCACCACA (14) 18.1 0.0181 E16.5 retina AATGTTTGAA (10) 1.8 0.0018 E16.5 retina ATGGTAAATG (2) 1.8 0.0018 E18.5 retina CACCACCACA (14) 23.6 0.0236 P0.5 retina CACCACCACA (14) 41.2 0.0412 P2.5 retina CACCACCACA (14) 24.6 0.0246 P4.5 retina CACCACCACA (14) 25.8 0.0258 P4.5 retina ATTCCGAATT (107) 2 0.002 P6.5 retina CACCACCACA (14) 28.3 0.0283 P6.5 retina ATTCCGAATT (107) 3.3 0.0033 P6.5 retina ATGGTAAATG (2) 1.7 0.0017 P10.5 crx- retina CACCACCACA (14) 13 0.013 P10.5 crx+ retina CACCACCACA (14) 17.3 0.0173 P10.5 crx+ retina ATGGTAAATG (2) 1.9 0.0019 Adult retinal CACCACCACA (14) 13 0.013 Adult retinal AATGTTTGAA (10) 1.9 0.0019 ONL CACCACCACA (14) 23 0.023 ONL ATTCCGAATT (107) 3.8 0.0038 ONL AATGTTTGAA (10) 1.9 0.0019