Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.6393	Dfy	Duffy blood group	1	1 H3 (1 94.0 cM)	13349
Gene Ontology	G-protein coupled receptor activity | G-protein coupled receptor protein signaling pathway | inflammatory response | integral to membrane | rhodopsin-like receptor activity
Human Homolog	FY[Duffy blood group]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

Total 11 In Situ Hybridization Images

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SAGE Tags

Total 38 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TCAACTTAAA 4.9 0.0049 P8 Cb GC TAGACAGAAG (3) 1.6 0.0016 Cb medulloblastoma TCAACTTAAA 11.6 0.0116 Cb medulloblastoma TAGGGAAAAA (7) 4.6 0.0046 P8 GC+1d culture TCAACTTAAA 9.1 0.0091 P8 GC+1d culture TAGACAGAAG (3) 1.1 0.0011 P8 GC+1d culture TCAATCCCAG (4) 1.1 0.0011 P8 GC+SHH+1d culture TCAACTTAAA 11.7 0.0117 P8 GC+SHH+1d culture TCAATCCCAG (4) 1.2 0.0012 3T3 fibroblasts TCAATCCCAG (4) 3.5 0.0035 P1 cortex TCAACTTAAA 4.5 0.0045 Hypothalamus TCAACTTAAA 1.8 0.0018 E12.5 retina TAGACAGAAG (3) 3.8 0.0038 E12.5 retina TAGGGAAAAA (7) 1.9 0.0019 E12.5 retina TCAACTTAAA 1.9 0.0019 E14.5 retina TAGGGAAAAA (7) 3.6 0.0036 E14.5 retina TCAACTTAAA 3.6 0.0036 E14.5 retina TAGACAGAAG (3) 1.8 0.0018 E16.5 retina TCAACTTAAA 5.4 0.0054 E16.5 retina TAGGGAAAAA (7) 3.6 0.0036 E18.5 retina TCAACTTAAA 7.3 0.0073 E18.5 retina TAGACAGAAG (3) 1.8 0.0018 P0.5 retina TCAACTTAAA 5.9 0.0059 P0.5 retina TAGACAGAAG (3) 3.9 0.0039 P2.5 retina TCAACTTAAA 14.1 0.0141 P2.5 retina TAGACAGAAG (3) 5.3 0.0053 P4.5 retina TCAACTTAAA 17.8 0.0178 P4.5 retina TAGACAGAAG (3) 2 0.002 P6.5 retina TCAACTTAAA 11.7 0.0117 P6.5 retina TAGACAGAAG (3) 1.7 0.0017 P6.5 retina TAGGGAAAAA (7) 1.7 0.0017 P10.5 crx- retina TCAACTTAAA 14.9 0.0149 P10.5 crx+ retina TCAACTTAAA 7.7 0.0077 P10.5 crx+ retina TAGACAGAAG (3) 1.9 0.0019 P10.5 crx+ retina TCAATCCCAG (4) 1.9 0.0019 Adult retinal TCAACTTAAA 7.4 0.0074 ONL TAGACAGAAG (3) 1.9 0.0019 ONL TCAACTTAAA 1.9 0.0019