Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.6461	D1Ertd564e	DNA segment, Chr 1, ERATO Doi 564, expressed	1	1 52.0 cM	52347
Mm.6461	Hrb	HIV-1 Rev binding protein	1		15463
Gene Ontology	acrosome formation | cytoplasmic vesicle | DNA binding | nucleus | regulation of GTPase activity | transport
Human Homolog	HRB[HIV-1 Rev binding protein]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 94 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TGGTTCTGTT (3) 6.5 0.0065 P8 Cb GC AATGCTCTAC (2) 3.3 0.0033 P8 Cb GC TTTTGCTACA (3) 3.3 0.0033 P8 Cb GC TGCAACACTG (5) 1.6 0.0016 Cb medulloblastoma TGGTTCTGTT (3) 11.6 0.0116 Cb medulloblastoma GTTTTTGTCT (2) 2.3 0.0023 Cb medulloblastoma TGCAACACTG (5) 2.3 0.0023 P8 GC+1d culture TGGTTCTGTT (3) 5.7 0.0057 P8 GC+1d culture TTTTGCTACA (3) 4.6 0.0046 P8 GC+1d culture AATGCTCTAC (2) 3.4 0.0034 P8 GC+1d culture GTTGCACCTG (2) 2.3 0.0023 P8 GC+1d culture TATGTGTATT (2) 1.1 0.0011 P8 GC+1d culture TGCAACACTG (5) 1.1 0.0011 P8 GC+1d culture TTTATATGCA (2) 1.1 0.0011 P8 GC+SHH+1d culture TGGTTCTGTT (3) 9.4 0.0094 P8 GC+SHH+1d culture TTTATATGCA (2) 3.5 0.0035 P8 GC+SHH+1d culture TTTTGCTACA (3) 2.3 0.0023 P8 GC+SHH+1d culture GTTTTTAGTT (2) 1.2 0.0012 3T3 fibroblasts GTCATAGCTG (590) 10.5 0.0105 3T3 fibroblasts AATGCTCTAC (2) 3.5 0.0035 3T3 fibroblasts GAGGGAAAAC (8) 3.5 0.0035 3T3 fibroblasts TGGTTCTGTT (3) 3.5 0.0035 E15 cortex TGGTTCTGTT (3) 9.9 0.0099 E15 cortex AATGCTCTAC (2) 4.9 0.0049 E15 cortex GTCATAGCTG (590) 4.9 0.0049 E15 cortex GTTTTTGTCT (2) 4.9 0.0049 E15 cortex TGCAACACTG (5) 4.9 0.0049 E15 cortex TTTTGCTACA (3) 4.9 0.0049 P1 cortex GTTGCACCTG (2) 4.5 0.0045 P1 cortex TTTTGCTACA (3) 4.5 0.0045 Hypothalamus TGGTTCTGTT (3) 14.5 0.0145 Hypothalamus ATCAGCTTTA (3) 1.8 0.0018 Hypothalamus CTGAGGTCTT (3) 1.8 0.0018 Hypothalamus GAGGGAAAAC (8) 1.8 0.0018 Hypothalamus GTTTTTAGTT (2) 1.8 0.0018 E12.5 retina AATGCTCTAC (2) 1.9 0.0019 E12.5 retina ATCAGCTTTA (3) 1.9 0.0019 E12.5 retina TCAACATTTT (2) 1.9 0.0019 E12.5 retina TGGTTCTGTT (3) 1.9 0.0019 E12.5 retina TTTTGCTACA (3) 1.9 0.0019 E14.5 retina TGGTTCTGTT (3) 20 0.02 E14.5 retina TTTTGCTACA (3) 7.3 0.0073 E14.5 retina AATGCTCTAC (2) 1.8 0.0018 E14.5 retina GTTGCACCTG (2) 1.8 0.0018 E14.5 retina TGCAACACTG (5) 1.8 0.0018 E16.5 retina TGGTTCTGTT (3) 9.1 0.0091 E16.5 retina TATGTGTATT (2) 3.6 0.0036 E16.5 retina TTTTGCTACA (3) 3.6 0.0036 E16.5 retina AATGCTCTAC (2) 1.8 0.0018 E16.5 retina CAGGTGGAAG (4) 1.8 0.0018 E16.5 retina TGCAACACTG (5) 1.8 0.0018 E18.5 retina TGGTTCTGTT (3) 7.3 0.0073 E18.5 retina TCAACATTTT (2) 1.8 0.0018 P0.5 retina TGGTTCTGTT (3) 7.9 0.0079 P0.5 retina GTCATAGCTG (590) 3.9 0.0039 P0.5 retina CAGGTGGAAG (4) 2 0.002 P0.5 retina GAGGGAAAAC (8) 2 0.002 P0.5 retina GTTTTTGTCT (2) 2 0.002 P0.5 retina TATGTGTATT (2) 2 0.002 P0.5 retina TTTTGCTACA (3) 2 0.002 P2.5 retina TGGTTCTGTT (3) 8.8 0.0088 P2.5 retina AAAATTAAAA (8) 1.8 0.0018 P2.5 retina CTGAGGTCTT (3) 1.8 0.0018 P2.5 retina GTCATAGCTG (590) 1.8 0.0018 P2.5 retina TTTATATGCA (2) 1.8 0.0018 P2.5 retina TTTTGCTACA (3) 1.8 0.0018 P4.5 retina TGGTTCTGTT (3) 19.8 0.0198 P4.5 retina GTCATAGCTG (590) 2 0.002 P4.5 retina GTTGCACCTG (2) 2 0.002 P4.5 retina TTTTGCTACA (3) 2 0.002 P6.5 retina TGGTTCTGTT (3) 13.3 0.0133 P6.5 retina AAAATTAAAA (8) 3.3 0.0033 P6.5 retina GTCATAGCTG (590) 3.3 0.0033 P6.5 retina CCCAAGTTTT (2) 1.7 0.0017 P6.5 retina GTTTTTAGTT (2) 1.7 0.0017 P6.5 retina TCAACATTTT (2) 1.7 0.0017 P6.5 retina TGCAACACTG (5) 1.7 0.0017 P6.5 retina TTTTGCTACA (3) 1.7 0.0017 P10.5 crx- retina TGGTTCTGTT (3) 20.4 0.0204 P10.5 crx- retina AATGCTCTAC (2) 7.4 0.0074 P10.5 crx- retina AAAATTAAAA (8) 1.9 0.0019 P10.5 crx- retina ATCAGCTTTA (3) 1.9 0.0019 P10.5 crx- retina TTTTGCTACA (3) 1.9 0.0019 P10.5 crx+ retina TGGTTCTGTT (3) 15.4 0.0154 P10.5 crx+ retina TTTTGCTACA (3) 5.8 0.0058 P10.5 crx+ retina AATGCTCTAC (2) 1.9 0.0019 P10.5 crx+ retina CCCAAGTTTT (2) 1.9 0.0019 Adult retinal TGGTTCTGTT (3) 7.4 0.0074 Adult retinal GTCATAGCTG (590) 1.9 0.0019 ONL GTCATAGCTG (590) 5.7 0.0057 ONL TGGTTCTGTT (3) 5.7 0.0057 ONL CCCAAGTTTT (2) 3.8 0.0038 ONL GTTGCACCTG (2) 1.9 0.0019 ONL TTTTGCTACA (3) 1.9 0.0019