Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.65906	2310033F14Rik	RIKEN cDNA 2310033F14 gene	3		69555
Mm.65906	Pbxip1	pre-B-cell leukemia transcription factor interacting protein 1	3	3 F1	229534
Human Homolog	PBXIP1[pre-B-cell leukemia transcription factor interacting protein 1]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

Total 5 In Situ Hybridization Images

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SAGE Tags

Total 84 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GTAGCTCACA (30) 16.3 0.0163 P8 Cb GC TGGGTGCTGG (64) 8.2 0.0082 P8 Cb GC CCTGAAGATG (10) 1.6 0.0016 Cb medulloblastoma GTAGCTCACA (30) 18.5 0.0185 Cb medulloblastoma TGGGTGCTGG (64) 9.2 0.0092 Cb medulloblastoma TGGAGGCCTG (9) 4.6 0.0046 Cb medulloblastoma TTGGATAATA (4) 4.6 0.0046 P8 GC+1d culture GTAGCTCACA (30) 27.4 0.0274 P8 GC+1d culture TGGGTGCTGG (64) 5.7 0.0057 P8 GC+1d culture TTGGATAATA (4) 2.3 0.0023 P8 GC+1d culture CACCCAGCTC (3) 1.1 0.0011 P8 GC+1d culture CCTGAAGATG (10) 1.1 0.0011 P8 GC+1d culture TGGAGGCCTG (9) 1.1 0.0011 P8 GC+SHH+1d culture GTAGCTCACA (30) 15.2 0.0152 P8 GC+SHH+1d culture TGGGTGCTGG (64) 3.5 0.0035 P8 GC+SHH+1d culture CCTGAAGATG (10) 2.3 0.0023 P8 GC+SHH+1d culture TGGAGGCCTG (9) 2.3 0.0023 P8 GC+SHH+1d culture TTGGATAATA (4) 2.3 0.0023 3T3 fibroblasts TGGGTGCTGG (64) 17.5 0.0175 3T3 fibroblasts GTAGCTCACA (30) 14 0.014 3T3 fibroblasts CACCCAGCTC (3) 7 0.007 3T3 fibroblasts CCTGAAGATG (10) 3.5 0.0035 3T3 fibroblasts TGGAGGCCTG (9) 3.5 0.0035 E15 cortex GTAGCTCACA (30) 29.7 0.0297 E15 cortex TGGGTGCTGG (64) 14.8 0.0148 P1 cortex GTAGCTCACA (30) 13.6 0.0136 P1 cortex TGGGTGCTGG (64) 13.6 0.0136 P1 cortex TGGAGGCCTG (9) 9.1 0.0091 P1 cortex CCTGAAGATG (10) 4.5 0.0045 Hypothalamus GTAGCTCACA (30) 29 0.029 Hypothalamus TGGGTGCTGG (64) 9.1 0.0091 Hypothalamus CCTGAAGATG (10) 1.8 0.0018 Hypothalamus TGGAGGCCTG (9) 1.8 0.0018 Hypothalamus TTGGATAATA (4) 1.8 0.0018 E12.5 retina GTAGCTCACA (30) 30 0.03 E12.5 retina TGGGTGCTGG (64) 9.4 0.0094 E12.5 retina CCTGAAGATG (10) 1.9 0.0019 E12.5 retina TGGAGGCCTG (9) 1.9 0.0019 E14.5 retina TGGGTGCTGG (64) 54.7 0.0547 E14.5 retina GTAGCTCACA (30) 31 0.031 E14.5 retina TTGGATAATA (4) 3.6 0.0036 E14.5 retina CCTGAAGATG (10) 1.8 0.0018 E16.5 retina GTAGCTCACA (30) 41.7 0.0417 E16.5 retina TGGGTGCTGG (64) 41.7 0.0417 E16.5 retina TGGAGGCCTG (9) 1.8 0.0018 E18.5 retina TGGGTGCTGG (64) 20 0.02 E18.5 retina GTAGCTCACA (30) 16.4 0.0164 E18.5 retina TTGGATAATA (4) 9.1 0.0091 E18.5 retina CACCCAGCTC (3) 1.8 0.0018 E18.5 retina TGGAGGCCTG (9) 1.8 0.0018 P0.5 retina GTAGCTCACA (30) 25.5 0.0255 P0.5 retina TGGGTGCTGG (64) 11.8 0.0118 P0.5 retina TGGAGGCCTG (9) 3.9 0.0039 P0.5 retina CCTGAAGATG (10) 2 0.002 P0.5 retina TTGGATAATA (4) 2 0.002 P2.5 retina GTAGCTCACA (30) 22.9 0.0229 P2.5 retina TGGGTGCTGG (64) 17.6 0.0176 P2.5 retina TGGAGGCCTG (9) 5.3 0.0053 P2.5 retina CACCCAGCTC (3) 3.5 0.0035 P2.5 retina TTGGATAATA (4) 3.5 0.0035 P4.5 retina GTAGCTCACA (30) 25.8 0.0258 P4.5 retina TGGGTGCTGG (64) 9.9 0.0099 P4.5 retina TTGGATAATA (4) 7.9 0.0079 P6.5 retina GTAGCTCACA (30) 18.3 0.0183 P6.5 retina TGGGTGCTGG (64) 13.3 0.0133 P6.5 retina TGGAGGCCTG (9) 3.3 0.0033 P6.5 retina TTGGATAATA (4) 3.3 0.0033 P6.5 retina CCTGAAGATG (10) 1.7 0.0017 P10.5 crx- retina TGGGTGCTGG (64) 20.4 0.0204 P10.5 crx- retina GTAGCTCACA (30) 16.7 0.0167 P10.5 crx- retina CCTGAAGATG (10) 5.6 0.0056 P10.5 crx+ retina GTAGCTCACA (30) 28.8 0.0288 P10.5 crx+ retina TGGGTGCTGG (64) 15.4 0.0154 P10.5 crx+ retina TTGGATAATA (4) 5.8 0.0058 P10.5 crx+ retina CACCCAGCTC (3) 1.9 0.0019 Adult retinal GTAGCTCACA (30) 16.7 0.0167 Adult retinal TGGGTGCTGG (64) 13 0.013 Adult retinal CCTGAAGATG (10) 3.7 0.0037 Adult retinal CACCCAGCTC (3) 1.9 0.0019 Adult retinal TGGAGGCCTG (9) 1.9 0.0019 ONL TGGGTGCTGG (64) 40.2 0.0402 ONL GTAGCTCACA (30) 24.9 0.0249 ONL CCTGAAGATG (10) 3.8 0.0038 ONL TTGGATAATA (4) 3.8 0.0038