Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.66264	Stx6	syntaxin 6	1		58244
Gene Ontology	integral to membrane | intracellular protein transport | membrane | protein transporter activity | transport
Human Homolog	STX6[syntaxin 6]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 61 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GAGGACCCCT (4) 3.3 0.0033 P8 Cb GC AAGGTGACAT 1.6 0.0016 Cb medulloblastoma GAGGCTGTGA (3) 6.9 0.0069 Cb medulloblastoma CCAACTTTCA 4.6 0.0046 Cb medulloblastoma CTGTATGTTC (5) 2.3 0.0023 P8 GC+1d culture CCAACTTTCA 3.4 0.0034 P8 GC+1d culture CTGTATGTTC (5) 2.3 0.0023 P8 GC+1d culture GAGGCTGTGA (3) 2.3 0.0023 P8 GC+1d culture GGCAGGCCTC (2) 2.3 0.0023 P8 GC+1d culture GAATGAAACC 1.1 0.0011 P8 GC+1d culture TGCCCGGCCG (2) 1.1 0.0011 P8 GC+SHH+1d culture CCAACTTTCA 2.3 0.0023 P8 GC+SHH+1d culture GAGGCTGTGA (3) 2.3 0.0023 P8 GC+SHH+1d culture GAATGAAACC 1.2 0.0012 P8 GC+SHH+1d culture GGCAGGCCTC (2) 1.2 0.0012 3T3 fibroblasts GAGGCTGTGA (3) 7 0.007 3T3 fibroblasts TGCCCGGCCG (2) 3.5 0.0035 E15 cortex CTGTATGTTC (5) 4.9 0.0049 E15 cortex GAATGAAACC 4.9 0.0049 E15 cortex GAGGCTGTGA (3) 4.9 0.0049 E15 cortex GGCAGGCCTC (2) 4.9 0.0049 E15 cortex TGCCCGGCCG (2) 4.9 0.0049 P1 cortex GGCAGGCCTC (2) 4.5 0.0045 Hypothalamus GAATGAAACC 1.8 0.0018 E12.5 retina CCAACTTTCA 1.9 0.0019 E12.5 retina GGCAGGCCTC (2) 1.9 0.0019 E14.5 retina CCAACTTTCA 1.8 0.0018 E14.5 retina GAGGCTGTGA (3) 1.8 0.0018 E14.5 retina GGCAGGCCTC (2) 1.8 0.0018 E16.5 retina GAGGCTGTGA (3) 5.4 0.0054 E16.5 retina GAATGAAACC 3.6 0.0036 E16.5 retina CCAACTTTCA 1.8 0.0018 E18.5 retina GGCAGGCCTC (2) 5.5 0.0055 E18.5 retina CCAACTTTCA 3.6 0.0036 P0.5 retina GAGGCTGTGA (3) 5.9 0.0059 P0.5 retina AAGGTGACAT 3.9 0.0039 P2.5 retina CTGTATGTTC (5) 1.8 0.0018 P2.5 retina GAATGAAACC 1.8 0.0018 P2.5 retina GAGGCTGTGA (3) 1.8 0.0018 P2.5 retina GGCAGGCCTC (2) 1.8 0.0018 P4.5 retina GGCAGGCCTC (2) 5.9 0.0059 P4.5 retina GAGGCTGTGA (3) 2 0.002 P6.5 retina CCAACTTTCA 5 0.005 P6.5 retina CTGTATGTTC (5) 5 0.005 P6.5 retina GGCAGGCCTC (2) 5 0.005 P6.5 retina AAGGTGACAT 1.7 0.0017 P6.5 retina GAGGACCCCT (4) 1.7 0.0017 P6.5 retina GAGGCTGTGA (3) 1.7 0.0017 P10.5 crx- retina GAGGCTGTGA (3) 7.4 0.0074 P10.5 crx- retina CCAACTTTCA 3.7 0.0037 P10.5 crx- retina CTGTATGTTC (5) 3.7 0.0037 P10.5 crx- retina GAATGAAACC 1.9 0.0019 P10.5 crx+ retina GAGGCTGTGA (3) 7.7 0.0077 P10.5 crx+ retina GAATGAAACC 3.8 0.0038 P10.5 crx+ retina GGCAGGCCTC (2) 1.9 0.0019 Adult retinal CCAACTTTCA 1.9 0.0019 Adult retinal GAATGAAACC 1.9 0.0019 Adult retinal GAGGACCCCT (4) 1.9 0.0019 Adult retinal GAGGCTGTGA (3) 1.9 0.0019 Adult retinal TGCCCGGCCG (2) 1.9 0.0019 ONL GAATGAAACC 1.9 0.0019