Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.67938	Cstf2	cleavage stimulation factor, 3' pre-RNA subunit 2	X		108062
Gene Ontology	mRNA cleavage | mRNA polyadenylation | nucleic acid binding | nucleus | RNA binding
Human Homolog	CSTF2[cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 86 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GACACCAGAG (7) 9.8 0.0098 P8 Cb GC ATTTTGGGGG (4) 3.3 0.0033 P8 Cb GC CAAGATATGG (2) 1.6 0.0016 P8 Cb GC GTTCTGGGGC (4) 1.6 0.0016 Cb medulloblastoma GACACCAGAG (7) 48.6 0.0486 Cb medulloblastoma ATTTTGGGGG (4) 6.9 0.0069 Cb medulloblastoma GTTTCTGAGA (2) 2.3 0.0023 Cb medulloblastoma TAACAATGTA 2.3 0.0023 P8 GC+1d culture TAACAATGTA 5.7 0.0057 P8 GC+1d culture ATTTTGGGGG (4) 4.6 0.0046 P8 GC+1d culture CAAGATATGG (2) 4.6 0.0046 P8 GC+1d culture GACACCAGAG (7) 4.6 0.0046 P8 GC+1d culture CCTGCTACCT (2) 2.3 0.0023 P8 GC+SHH+1d culture GACACCAGAG (7) 9.4 0.0094 P8 GC+SHH+1d culture ATTTTGGGGG (4) 5.9 0.0059 P8 GC+SHH+1d culture TAACAATGTA 4.7 0.0047 P8 GC+SHH+1d culture GTTCTGGGGC (4) 3.5 0.0035 P8 GC+SHH+1d culture CAAGATATGG (2) 1.2 0.0012 P8 GC+SHH+1d culture CCTGCTACCT (2) 1.2 0.0012 3T3 fibroblasts GACACCAGAG (7) 10.5 0.0105 3T3 fibroblasts ATTTTGGGGG (4) 7 0.007 3T3 fibroblasts GTTCTGGGGC (4) 3.5 0.0035 E15 cortex ATTTTGGGGG (4) 19.8 0.0198 E15 cortex GACACCAGAG (7) 14.8 0.0148 P1 cortex GACACCAGAG (7) 36.4 0.0364 P1 cortex ATTTTGGGGG (4) 27.3 0.0273 P1 cortex CAGGTGGTGC (3) 4.5 0.0045 P1 cortex CCTGCTACCT (2) 4.5 0.0045 Hypothalamus GACACCAGAG (7) 45.3 0.0453 Hypothalamus ATTTTGGGGG (4) 1.8 0.0018 Hypothalamus CAGGTGGTGC (3) 1.8 0.0018 Hypothalamus GTTTCTGAGA (2) 1.8 0.0018 Hypothalamus TAACAATGTA 1.8 0.0018 E12.5 retina ATTTTGGGGG (4) 9.4 0.0094 E12.5 retina CAGGTGGTGC (3) 1.9 0.0019 E12.5 retina GTTGCCTTCC (2) 1.9 0.0019 E12.5 retina TAACAATGTA 1.9 0.0019 E14.5 retina GACACCAGAG (7) 29.2 0.0292 E14.5 retina ATTTTGGGGG (4) 3.6 0.0036 E14.5 retina CAAGATATGG (2) 3.6 0.0036 E14.5 retina CAGGTGGTGC (3) 3.6 0.0036 E14.5 retina TAACAATGTA 1.8 0.0018 E16.5 retina GACACCAGAG (7) 21.7 0.0217 E16.5 retina ATTTTGGGGG (4) 3.6 0.0036 E16.5 retina CAAGATATGG (2) 3.6 0.0036 E16.5 retina TAACAATGTA 3.6 0.0036 E16.5 retina CCTGCTACCT (2) 1.8 0.0018 E16.5 retina GTTCTGGGGC (4) 1.8 0.0018 E16.5 retina GTTTCTGAGA (2) 1.8 0.0018 E18.5 retina GACACCAGAG (7) 16.4 0.0164 E18.5 retina TAACAATGTA 1.8 0.0018 P0.5 retina ATTTTGGGGG (4) 9.8 0.0098 P0.5 retina CAAGATATGG (2) 3.9 0.0039 P0.5 retina CCTGCTACCT (2) 3.9 0.0039 P0.5 retina GACACCAGAG (7) 2 0.002 P0.5 retina TAACAATGTA 2 0.002 P2.5 retina GACACCAGAG (7) 12.3 0.0123 P2.5 retina CAAGATATGG (2) 7 0.007 P2.5 retina ATTTTGGGGG (4) 3.5 0.0035 P2.5 retina GTTGCCTTCC (2) 1.8 0.0018 P2.5 retina TAACAATGTA 1.8 0.0018 P4.5 retina GACACCAGAG (7) 19.8 0.0198 P4.5 retina ATTTTGGGGG (4) 5.9 0.0059 P4.5 retina GTTCTGGGGC (4) 2 0.002 P6.5 retina GACACCAGAG (7) 16.7 0.0167 P6.5 retina TAACAATGTA 5 0.005 P6.5 retina ATTTTGGGGG (4) 3.3 0.0033 P6.5 retina CAAGATATGG (2) 1.7 0.0017 P6.5 retina CAGGTGGTGC (3) 1.7 0.0017 P6.5 retina CCTGCTACCT (2) 1.7 0.0017 P10.5 crx- retina ATTTTGGGGG (4) 18.6 0.0186 P10.5 crx- retina GACACCAGAG (7) 14.9 0.0149 P10.5 crx+ retina GACACCAGAG (7) 21.1 0.0211 P10.5 crx+ retina ATTTTGGGGG (4) 5.8 0.0058 P10.5 crx+ retina CAAGATATGG (2) 3.8 0.0038 P10.5 crx+ retina GTTTCTGAGA (2) 1.9 0.0019 P10.5 crx+ retina TAACAATGTA 1.9 0.0019 Adult retinal CCTGCTACCT (2) 14.8 0.0148 Adult retinal GACACCAGAG (7) 14.8 0.0148 Adult retinal ATTTTGGGGG (4) 3.7 0.0037 Adult retinal CAAGATATGG (2) 1.9 0.0019 Adult retinal CAGGTGGTGC (3) 1.9 0.0019 Adult retinal GTTGCCTTCC (2) 1.9 0.0019 ONL CCTGCTACCT (2) 7.7 0.0077 ONL ATTTTGGGGG (4) 1.9 0.0019 ONL TAACAATGTA 1.9 0.0019