Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.6822	Phc1	polyhomeotic-like 1 (Drosophila)	6	6 F2 (6 57.0 cM)	13619
Gene Ontology	development | DNA binding | nuclear body | nucleus | protein binding
Human Homolog	LOC283368[similar to Polyhomeotic-like protein 1 (Early development regulator protein 1) (HPH1)]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

Total 13 In Situ Hybridization Images

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SAGE Tags

Total 50 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GTGACAGCTT (2) 3.3 0.0033 P8 Cb GC TTGTGAAAGT (2) 3.3 0.0033 P8 Cb GC AACATCAAAT (2) 1.6 0.0016 P8 Cb GC AGGTCAGGAG 1.6 0.0016 P8 Cb GC TGGCTGTTGC (2) 1.6 0.0016 P8 GC+1d culture GTGACAGCTT (2) 3.4 0.0034 P8 GC+1d culture TGGCTGTTGC (2) 2.3 0.0023 P8 GC+1d culture CTGTCTGGTT (5) 1.1 0.0011 P8 GC+1d culture TTGTGAAAGT (2) 1.1 0.0011 P8 GC+SHH+1d culture GTGACAGCTT (2) 8.2 0.0082 P8 GC+SHH+1d culture TGGCTGTTGC (2) 5.9 0.0059 E15 cortex GTGACAGCTT (2) 9.9 0.0099 P1 cortex CTGTCTGGTT (5) 4.5 0.0045 P1 cortex TGGCTGTTGC (2) 4.5 0.0045 Hypothalamus GTGACAGCTT (2) 3.6 0.0036 E12.5 retina GTGACAGCTT (2) 5.6 0.0056 E12.5 retina TGGCTGTTGC (2) 5.6 0.0056 E14.5 retina GTGACAGCTT (2) 5.5 0.0055 E14.5 retina TGGCTGTTGC (2) 5.5 0.0055 E16.5 retina GTGACAGCTT (2) 9.1 0.0091 E16.5 retina TGGCTGTTGC (2) 7.2 0.0072 E16.5 retina AACATCAAAT (2) 1.8 0.0018 E16.5 retina CTGTCTGGTT (5) 1.8 0.0018 E18.5 retina CTGTCTGGTT (5) 3.6 0.0036 E18.5 retina GTGACAGCTT (2) 3.6 0.0036 P0.5 retina GTGACAGCTT (2) 17.7 0.0177 P0.5 retina TGGCTGTTGC (2) 9.8 0.0098 P0.5 retina AACATCAAAT (2) 2 0.002 P0.5 retina CTGTCTGGTT (5) 2 0.002 P2.5 retina GTGACAGCTT (2) 12.3 0.0123 P2.5 retina TGGCTGTTGC (2) 7 0.007 P2.5 retina AACATCAAAT (2) 1.8 0.0018 P4.5 retina GTGACAGCTT (2) 4 0.004 P4.5 retina TGGCTGTTGC (2) 2 0.002 P6.5 retina TGGCTGTTGC (2) 18.3 0.0183 P6.5 retina GTGACAGCTT (2) 11.7 0.0117 P6.5 retina TTGTGAAAGT (2) 1.7 0.0017 P10.5 crx- retina GTGACAGCTT (2) 3.7 0.0037 P10.5 crx- retina TGGCTGTTGC (2) 3.7 0.0037 P10.5 crx+ retina GTGACAGCTT (2) 5.8 0.0058 P10.5 crx+ retina GCACACACTT (3) 3.8 0.0038 P10.5 crx+ retina CTGTCTGGTT (5) 1.9 0.0019 Adult retinal GTGACAGCTT (2) 7.4 0.0074 Adult retinal CTGTCTGGTT (5) 5.6 0.0056 Adult retinal GCACACACTT (3) 5.6 0.0056 Adult retinal TGGCTGTTGC (2) 3.7 0.0037 ONL GCACACACTT (3) 9.6 0.0096 ONL AGGTCAGGAG 3.8 0.0038 ONL GTGACAGCTT (2) 1.9 0.0019 ONL TGGCTGTTGC (2) 1.9 0.0019