Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.68291
5730478M09Rik
RIKEN cDNA 5730478M09 gene
16
70573
Human Homolog
FLJ10560[hypothetical protein FLJ10560]
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 52 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
CAAAACAGAA
(
6
)
1.6
0.0016
P8 Cb GC
GAGCCACGGC (
4
)
1.6
0.0016
P8 Cb GC
GCCAGGACTG
(
2
)
1.6
0.0016
Cb medulloblastoma
CAGGTAAAAC (
4
)
2.3
0.0023
Cb medulloblastoma
GAGCCACGGC (
4
)
2.3
0.0023
Cb medulloblastoma
GCCAGGACTG
(
2
)
2.3
0.0023
P8 GC+1d culture
GCCAGGACTG
(
2
)
6.8
0.0068
P8 GC+1d culture
GAGCCACGGC (
4
)
1.1
0.0011
P8 GC+1d culture
TGCACACGTG (
6
)
1.1
0.0011
P8 GC+SHH+1d culture
GCCAGGACTG
(
2
)
5.9
0.0059
P8 GC+SHH+1d culture
GAGCCACGGC (
4
)
3.5
0.0035
3T3 fibroblasts
CAGGTAAAAC (
4
)
3.5
0.0035
3T3 fibroblasts
GCCAGGACTG
(
2
)
3.5
0.0035
E15 cortex
GCCAGGACTG
(
2
)
4.9
0.0049
P1 cortex
TGCACACGTG (
6
)
4.5
0.0045
Hypothalamus
GAGCCACGGC (
4
)
1.8
0.0018
E12.5 retina
CAAAACAGAA
(
6
)
1.9
0.0019
E12.5 retina
GAGCCACGGC (
4
)
1.9
0.0019
E12.5 retina
GCCAGGACTG
(
2
)
1.9
0.0019
E12.5 retina
TGCTGGGATT (
12
)
1.9
0.0019
E14.5 retina
CAGGTAAAAC (
4
)
3.6
0.0036
E14.5 retina
GCCAGGACTG
(
2
)
1.8
0.0018
E14.5 retina
TGGGTGCCTG (
2
)
1.8
0.0018
E16.5 retina
AAATTGTATA
(
2
)
1.8
0.0018
E16.5 retina
CAGGTAAAAC (
4
)
1.8
0.0018
E16.5 retina
TGCACACGTG (
6
)
1.8
0.0018
E18.5 retina
TGCTGGGATT (
12
)
7.3
0.0073
E18.5 retina
CAGGTAAAAC (
4
)
3.6
0.0036
E18.5 retina
AAATTGTATA
(
2
)
1.8
0.0018
E18.5 retina
CAAAACAGAA
(
6
)
1.8
0.0018
E18.5 retina
GAGCCACGGC (
4
)
1.8
0.0018
E18.5 retina
TGGGTGCCTG (
2
)
1.8
0.0018
P0.5 retina
CAGGTAAAAC (
4
)
7.9
0.0079
P0.5 retina
GCCAGGACTG
(
2
)
3.9
0.0039
P0.5 retina
AAATTGTATA
(
2
)
2
0.002
P2.5 retina
CAAAACAGAA
(
6
)
1.8
0.0018
P2.5 retina
CAGGTAAAAC (
4
)
1.8
0.0018
P2.5 retina
TGCTGGGATT (
12
)
1.8
0.0018
P4.5 retina
GCCAGGACTG
(
2
)
5.9
0.0059
P4.5 retina
CAGGTAAAAC (
4
)
2
0.002
P6.5 retina
GCCAGGACTG
(
2
)
10
0.01
P6.5 retina
TGCTGGGATT (
12
)
1.7
0.0017
P10.5 crx- retina
GCCAGGACTG
(
2
)
3.7
0.0037
P10.5 crx+ retina
GAGCCACGGC (
4
)
3.8
0.0038
P10.5 crx+ retina
TGCACACGTG (
6
)
3.8
0.0038
P10.5 crx+ retina
AAATTGTATA
(
2
)
1.9
0.0019
P10.5 crx+ retina
TGGGTGCCTG (
2
)
1.9
0.0019
Adult retinal
TGCTGGGATT (
12
)
3.7
0.0037
Adult retinal
TGCACACGTG (
6
)
1.9
0.0019
ONL
CAGGTAAAAC (
4
)
3.8
0.0038
ONL
TGCTGGGATT (
12
)
3.8
0.0038
ONL
TGCACACGTG (
6
)
1.9
0.0019
