Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.69751	Pep4	peptidase 4	7	7 15.0 cM	18624
Gene Ontology	collagen catabolism | dipeptidase activity | hydrolase activity | manganese ion binding | metalloexopeptidase activity | metallopeptidase activity | peptidase activity | proteolysis and peptidolysis | X-Pro dipeptidase activity
Human Homolog	PEPD[peptidase D]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 83 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC CAGAATGGAA (2) 4.9 0.0049 P8 Cb GC GGTAAAATAT (2) 4.9 0.0049 P8 Cb GC GGCCAGCCCT (4) 1.6 0.0016 P8 Cb GC TTGTTTATTG (2) 1.6 0.0016 Cb medulloblastoma CAGAATGGAA (2) 6.9 0.0069 Cb medulloblastoma GGTAAAATAT (2) 6.9 0.0069 Cb medulloblastoma TTGTTTATTG (2) 4.6 0.0046 Cb medulloblastoma TTGTTAAAAA (2) 2.3 0.0023 P8 GC+1d culture GGTAAAATAT (2) 13.7 0.0137 P8 GC+1d culture CAGAATGGAA (2) 4.6 0.0046 P8 GC+1d culture GTCTGTGGGG (5) 4.6 0.0046 P8 GC+1d culture TTAGAAGGAT (2) 4.6 0.0046 P8 GC+1d culture GGCCAGCCCT (4) 1.1 0.0011 P8 GC+SHH+1d culture GGTAAAATAT (2) 29.3 0.0293 P8 GC+SHH+1d culture GTCTGTGGGG (5) 5.9 0.0059 P8 GC+SHH+1d culture CAGAATGGAA (2) 3.5 0.0035 P8 GC+SHH+1d culture TTGTTTATTG (2) 3.5 0.0035 P8 GC+SHH+1d culture CTGGAGCCCC (4) 2.3 0.0023 P8 GC+SHH+1d culture GGCCAGCCCT (4) 2.3 0.0023 P8 GC+SHH+1d culture TTAGAAGGAT (2) 1.2 0.0012 3T3 fibroblasts CTGGAGCCCC (4) 17.5 0.0175 3T3 fibroblasts CAGAATGGAA (2) 3.5 0.0035 E15 cortex CTGGAGCCCC (4) 4.9 0.0049 P1 cortex CTGGAGCCCC (4) 9.1 0.0091 P1 cortex TTAGAAGGAT (2) 9.1 0.0091 P1 cortex CAGAATGGAA (2) 4.5 0.0045 P1 cortex GGTAAAATAT (2) 4.5 0.0045 P1 cortex TTGTTAAAAA (2) 4.5 0.0045 P1 cortex TTGTTTATTG (2) 4.5 0.0045 Hypothalamus CAGAATGGAA (2) 7.2 0.0072 Hypothalamus CTGGAGCCCC (4) 1.8 0.0018 Hypothalamus TTAGAAGGAT (2) 1.8 0.0018 Hypothalamus TTGTTTATTG (2) 1.8 0.0018 E12.5 retina CAGAATGGAA (2) 9.4 0.0094 E12.5 retina GGTAAAATAT (2) 9.4 0.0094 E12.5 retina TTAGAAGGAT (2) 5.6 0.0056 E14.5 retina CAGAATGGAA (2) 7.3 0.0073 E14.5 retina TTGTTTATTG (2) 3.6 0.0036 E14.5 retina GGACTTTTGC (3) 1.8 0.0018 E14.5 retina GGTAAAATAT (2) 1.8 0.0018 E16.5 retina CAGAATGGAA (2) 9.1 0.0091 E16.5 retina GGTAAAATAT (2) 3.6 0.0036 E16.5 retina TTAGAAGGAT (2) 3.6 0.0036 E16.5 retina GGCCAGCCCT (4) 1.8 0.0018 E16.5 retina TTGTTTATTG (2) 1.8 0.0018 E18.5 retina CAGAATGGAA (2) 12.7 0.0127 E18.5 retina GGACTTTTGC (3) 7.3 0.0073 E18.5 retina GGTAAAATAT (2) 5.5 0.0055 E18.5 retina TTAGAAGGAT (2) 3.6 0.0036 E18.5 retina TTGTTTATTG (2) 3.6 0.0036 E18.5 retina CTGGAGCCCC (4) 1.8 0.0018 E18.5 retina GTCTGTGGGG (5) 1.8 0.0018 P0.5 retina GGTAAAATAT (2) 9.8 0.0098 P0.5 retina CTGGAGCCCC (4) 5.9 0.0059 P0.5 retina TTAGAAGGAT (2) 2 0.002 P2.5 retina CAGAATGGAA (2) 7 0.007 P2.5 retina GGTAAAATAT (2) 3.5 0.0035 P2.5 retina GGACTTTTGC (3) 1.8 0.0018 P2.5 retina TTAGAAGGAT (2) 1.8 0.0018 P4.5 retina GGTAAAATAT (2) 9.9 0.0099 P4.5 retina TTAGAAGGAT (2) 4 0.004 P4.5 retina TTGTTTATTG (2) 4 0.004 P4.5 retina CAGAATGGAA (2) 2 0.002 P4.5 retina CTGGAGCCCC (4) 2 0.002 P4.5 retina GTCTGTGGGG (5) 2 0.002 P6.5 retina GGTAAAATAT (2) 23.3 0.0233 P6.5 retina CTGGAGCCCC (4) 6.7 0.0067 P6.5 retina CAGAATGGAA (2) 1.7 0.0017 P6.5 retina GGACTTTTGC (3) 1.7 0.0017 P10.5 crx- retina CAGAATGGAA (2) 7.4 0.0074 P10.5 crx- retina GCACCCCAAA (3) 1.9 0.0019 P10.5 crx- retina TTGTTAAAAA (2) 1.9 0.0019 P10.5 crx+ retina CAGAATGGAA (2) 5.8 0.0058 P10.5 crx+ retina CTGGAGCCCC (4) 3.8 0.0038 P10.5 crx+ retina GGTAAAATAT (2) 3.8 0.0038 P10.5 crx+ retina GCACCCCAAA (3) 1.9 0.0019 P10.5 crx+ retina GTCTGTGGGG (5) 1.9 0.0019 P10.5 crx+ retina TTGTTAAAAA (2) 1.9 0.0019 Adult retinal GTCTGTGGGG (5) 3.7 0.0037 Adult retinal GCACCCCAAA (3) 1.9 0.0019 ONL CAGAATGGAA (2) 1.9 0.0019 ONL GGTAAAATAT (2) 1.9 0.0019 ONL TTGTTTATTG (2) 1.9 0.0019