Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.71062
1700048O20Rik
RIKEN cDNA 1700048O20 gene
9
69430
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 51 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
TGTATAAAAA (
7
)
27.7
0.0277
P8 Cb GC
TGCAAAAAAA (
21
)
4.9
0.0049
P8 Cb GC
GCCTCTACAT
1.6
0.0016
Cb medulloblastoma
TGTATAAAAA (
7
)
50.9
0.0509
Cb medulloblastoma
TGCAAAAAAA (
21
)
13.9
0.0139
P8 GC+1d culture
TGTATAAAAA (
7
)
45.7
0.0457
P8 GC+1d culture
TGCAAAAAAA (
21
)
9.1
0.0091
P8 GC+1d culture
AGGCAGAGGG (
3
)
2.3
0.0023
P8 GC+SHH+1d culture
TGTATAAAAA (
7
)
72.6
0.0726
P8 GC+SHH+1d culture
TGCAAAAAAA (
21
)
15.2
0.0152
E15 cortex
TGTATAAAAA (
7
)
9.9
0.0099
P1 cortex
TGTATAAAAA (
7
)
145.4
0.1454
Hypothalamus
TGTATAAAAA (
7
)
77.9
0.0779
Hypothalamus
TGCAAAAAAA (
21
)
9.1
0.0091
Hypothalamus
GCCTCTACAT
3.6
0.0036
Hypothalamus
AGGCAGAGGG (
3
)
1.8
0.0018
E12.5 retina
TGTATAAAAA (
7
)
26.3
0.0263
E12.5 retina
GCCTCTACAT
1.9
0.0019
E12.5 retina
TGCAAAAAAA (
21
)
1.9
0.0019
E14.5 retina
TGTATAAAAA (
7
)
51
0.051
E14.5 retina
AGGCAGAGGG (
3
)
1.8
0.0018
E14.5 retina
GAAGTAAAAG (
2
)
1.8
0.0018
E14.5 retina
TGCAAAAAAA (
21
)
1.8
0.0018
E16.5 retina
TGTATAAAAA (
7
)
56.1
0.0561
E16.5 retina
TGCAAAAAAA (
21
)
5.4
0.0054
E18.5 retina
TGTATAAAAA (
7
)
111
0.111
E18.5 retina
TGCAAAAAAA (
21
)
20
0.02
E18.5 retina
GCCTCTACAT
1.8
0.0018
P0.5 retina
TGTATAAAAA (
7
)
25.5
0.0255
P0.5 retina
TGCAAAAAAA (
21
)
7.9
0.0079
P2.5 retina
TGTATAAAAA (
7
)
42.2
0.0422
P2.5 retina
GCCTCTACAT
3.5
0.0035
P2.5 retina
TGCAAAAAAA (
21
)
3.5
0.0035
P2.5 retina
GAAGTAAAAG (
2
)
1.8
0.0018
P4.5 retina
TGTATAAAAA (
7
)
69.3
0.0693
P4.5 retina
TGCAAAAAAA (
21
)
4
0.004
P4.5 retina
GAAGTAAAAG (
2
)
2
0.002
P4.5 retina
GCCTCTACAT
2
0.002
P6.5 retina
TGTATAAAAA (
7
)
76.7
0.0767
P6.5 retina
GCCTCTACAT
5
0.005
P6.5 retina
TGCAAAAAAA (
21
)
5
0.005
P10.5 crx- retina
TGTATAAAAA (
7
)
31.6
0.0316
P10.5 crx+ retina
TGTATAAAAA (
7
)
53.8
0.0538
P10.5 crx+ retina
TGCAAAAAAA (
21
)
9.6
0.0096
P10.5 crx+ retina
GCCTCTACAT
3.8
0.0038
Adult retinal
TGTATAAAAA (
7
)
20.4
0.0204
Adult retinal
TGCAAAAAAA (
21
)
5.6
0.0056
Adult retinal
GCCTCTACAT
1.9
0.0019
ONL
TGTATAAAAA (
7
)
26.8
0.0268
ONL
TGCAAAAAAA (
21
)
7.7
0.0077
ONL
GCCTCTACAT
3.8
0.0038
