Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.7142	Mbd3	methyl-CpG binding domain protein 3	10	10 43.0 cM	17192
Gene Ontology	chromatin | DNA binding | DNA methylation | nucleus | regulation of transcription, DNA-dependent
Human Homolog	MBD3[methyl-CpG binding domain protein 3]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 58 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TGCAGGAGCT (3) 8.2 0.0082 P8 Cb GC TGGAGGAGCT (4) 8.2 0.0082 P8 Cb GC ACCAACCGTC (3) 1.6 0.0016 P8 Cb GC GTGACAGATG (4) 1.6 0.0016 P8 Cb GC TGAGGAGCTG (10) 1.6 0.0016 Cb medulloblastoma ACCAACCGTC (3) 2.3 0.0023 P8 GC+1d culture TGCAGGAGCT (3) 16 0.016 P8 GC+1d culture TGGAGGAGCT (4) 10.3 0.0103 P8 GC+1d culture GTGACAGATG (4) 1.1 0.0011 P8 GC+1d culture TGAGGAGCTG (10) 1.1 0.0011 P8 GC+SHH+1d culture TGCAGGAGCT (3) 21.1 0.0211 P8 GC+SHH+1d culture TGGAGGAGCT (4) 5.9 0.0059 P8 GC+SHH+1d culture GACTTGCCCA 1.2 0.0012 3T3 fibroblasts TGCAGGAGCT (3) 17.5 0.0175 E15 cortex GACCTCAGCA (10) 9.9 0.0099 E15 cortex TGCAGGAGCT (3) 9.9 0.0099 E15 cortex TGGAGGAGCT (4) 4.9 0.0049 P1 cortex TGCAGGAGCT (3) 9.1 0.0091 Hypothalamus TGCAGGAGCT (3) 3.6 0.0036 Hypothalamus TGGAGGAGCT (4) 3.6 0.0036 Hypothalamus GACCTCAGCA (10) 1.8 0.0018 Hypothalamus GTGACAGATG (4) 1.8 0.0018 Hypothalamus TGAGGAGCTG (10) 1.8 0.0018 E12.5 retina TGCAGGAGCT (3) 9.4 0.0094 E14.5 retina TGCAGGAGCT (3) 5.5 0.0055 E14.5 retina GACTTGCCCA 1.8 0.0018 E16.5 retina TGCAGGAGCT (3) 16.3 0.0163 E16.5 retina TGGAGGAGCT (4) 1.8 0.0018 E16.5 retina TGGGGAGCTT (2) 1.8 0.0018 E18.5 retina TGCAGGAGCT (3) 3.6 0.0036 E18.5 retina TGAGGAGCTG (10) 1.8 0.0018 E18.5 retina TGGAGGAGCT (4) 1.8 0.0018 P0.5 retina TGCAGGAGCT (3) 17.7 0.0177 P0.5 retina TGGAGGAGCT (4) 7.9 0.0079 P0.5 retina ACCAACCGTC (3) 3.9 0.0039 P0.5 retina TGGGGAGCTT (2) 3.9 0.0039 P2.5 retina TGCAGGAGCT (3) 7 0.007 P2.5 retina TGGAGGAGCT (4) 3.5 0.0035 P2.5 retina GTGACAGATG (4) 1.8 0.0018 P2.5 retina TGAGGAGCTG (10) 1.8 0.0018 P4.5 retina TGCAGGAGCT (3) 5.9 0.0059 P4.5 retina TGGAGGAGCT (4) 4 0.004 P4.5 retina GACTTGCCCA 2 0.002 P6.5 retina TGCAGGAGCT (3) 8.3 0.0083 P6.5 retina TGGAGGAGCT (4) 6.7 0.0067 P6.5 retina GTGACAGATG (4) 1.7 0.0017 P10.5 crx- retina TGCAGGAGCT (3) 13 0.013 P10.5 crx- retina TGGAGGAGCT (4) 5.6 0.0056 P10.5 crx- retina ACCAACCGTC (3) 1.9 0.0019 P10.5 crx- retina TGAGGAGCTG (10) 1.9 0.0019 P10.5 crx+ retina TGCAGGAGCT (3) 5.8 0.0058 P10.5 crx+ retina TGAGGAGCTG (10) 1.9 0.0019 P10.5 crx+ retina TGGAGGAGCT (4) 1.9 0.0019 Adult retinal TGCAGGAGCT (3) 11.1 0.0111 Adult retinal TGGAGGAGCT (4) 5.6 0.0056 Adult retinal TGAGGAGCTG (10) 3.7 0.0037 ONL TGCAGGAGCT (3) 3.8 0.0038 ONL GTGACAGATG (4) 1.9 0.0019