Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.71498	D5Ertd798e	DNA segment, Chr 5, ERATO Doi 798, expressed	5	5 25.0 cM	52409
Mm.71498	Mlr1	Mblk1-related protein-1	5	5 B3	209707
Gene Ontology	nucleus | RNA polymerase II transcription factor activity | transcription from Pol II promoter
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

Total 10 In Situ Hybridization Images

Images -- Click to Enlarge

SAGE Tags

Total 49 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC ACTTCAGACT (5) 8.2 0.0082 P8 Cb GC TACTGTAATT (4) 8.2 0.0082 P8 Cb GC CTGCCCATTG (4) 4.9 0.0049 P8 Cb GC TTTCCTGAAA (6) 1.6 0.0016 Cb medulloblastoma CTGCCCATTG (4) 6.9 0.0069 Cb medulloblastoma TACTGTAATT (4) 2.3 0.0023 P8 GC+1d culture TACTGTAATT (4) 9.1 0.0091 P8 GC+1d culture CTGCCCATTG (4) 5.7 0.0057 P8 GC+1d culture ACTTCAGACT (5) 2.3 0.0023 P8 GC+SHH+1d culture TACTGTAATT (4) 9.4 0.0094 P8 GC+SHH+1d culture ACTTCAGACT (5) 5.9 0.0059 P8 GC+SHH+1d culture CTGCCCATTG (4) 3.5 0.0035 P8 GC+SHH+1d culture CAAGGTCCAA (4) 1.2 0.0012 3T3 fibroblasts CTGCCCATTG (4) 7 0.007 3T3 fibroblasts TACTGTAATT (4) 3.5 0.0035 E15 cortex TACTGTAATT (4) 9.9 0.0099 P1 cortex CTGCCCATTG (4) 4.5 0.0045 Hypothalamus CTGCCCATTG (4) 1.8 0.0018 E12.5 retina ACTTCAGACT (5) 16.9 0.0169 E12.5 retina TACTGTAATT (4) 7.5 0.0075 E12.5 retina CTGCCCATTG (4) 3.8 0.0038 E14.5 retina ACTTCAGACT (5) 12.8 0.0128 E16.5 retina ACTTCAGACT (5) 12.7 0.0127 E16.5 retina TACTGTAATT (4) 3.6 0.0036 E16.5 retina TTTCCTGAAA (6) 1.8 0.0018 E18.5 retina TACTGTAATT (4) 7.3 0.0073 E18.5 retina ACTTCAGACT (5) 3.6 0.0036 E18.5 retina CTGCCCATTG (4) 1.8 0.0018 P0.5 retina CTGCCCATTG (4) 7.9 0.0079 P0.5 retina CAAGGTCCAA (4) 5.9 0.0059 P0.5 retina ACTTCAGACT (5) 2 0.002 P0.5 retina TACTGTAATT (4) 2 0.002 P2.5 retina ACTTCAGACT (5) 7 0.007 P2.5 retina TTTTCATTCA (4) 5.3 0.0053 P2.5 retina TACTGTAATT (4) 3.5 0.0035 P2.5 retina CTGCCCATTG (4) 1.8 0.0018 P4.5 retina TACTGTAATT (4) 9.9 0.0099 P4.5 retina ACTTCAGACT (5) 2 0.002 P4.5 retina TTTCCTGAAA (6) 2 0.002 P4.5 retina TTTTCATTCA (4) 2 0.002 P6.5 retina TACTGTAATT (4) 8.3 0.0083 P10.5 crx- retina TACTGTAATT (4) 13 0.013 P10.5 crx+ retina TACTGTAATT (4) 7.7 0.0077 Adult retinal ACTTCAGACT (5) 1.9 0.0019 Adult retinal CAAGGTCCAA (4) 1.9 0.0019 Adult retinal CTGCCCATTG (4) 1.9 0.0019 Adult retinal TACTGTAATT (4) 1.9 0.0019 ONL TACTGTAATT (4) 3.8 0.0038 ONL TTTCCTGAAA (6) 1.9 0.0019