Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.72173
Sgcg
sarcoglycan, gamma (dystrophin-associated glycoprotein)
14
24053
Mm.72173
5430420E18Rik
RIKEN cDNA 5430420E18 gene
14
74505
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 41 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
TTACAGCAGA (
11
)
6.5
0.0065
P8 Cb GC
GCTGGCTGGC
(
10
)
1.6
0.0016
P8 Cb GC
GTGTTTCATC (
2
)
1.6
0.0016
P8 Cb GC
TTCCTGCCTT (
11
)
1.6
0.0016
Cb medulloblastoma
TTACAGCAGA (
11
)
9.2
0.0092
P8 GC+1d culture
TTACAGCAGA (
11
)
17.1
0.0171
P8 GC+1d culture
TTCCTGCCTT (
11
)
2.3
0.0023
P8 GC+1d culture
GCTGGCTGGC
(
10
)
1.1
0.0011
P8 GC+SHH+1d culture
TTACAGCAGA (
11
)
5.9
0.0059
P8 GC+SHH+1d culture
TTCCTGCCTT (
11
)
3.5
0.0035
P8 GC+SHH+1d culture
GCTGGCTGGC
(
10
)
1.2
0.0012
3T3 fibroblasts
GCTGGCTGGC
(
10
)
3.5
0.0035
E15 cortex
GTGTTTCATC (
2
)
4.9
0.0049
P1 cortex
GCTGGCTGGC
(
10
)
4.5
0.0045
Hypothalamus
TTACAGCAGA (
11
)
10.9
0.0109
E12.5 retina
TTACAGCAGA (
11
)
3.8
0.0038
E14.5 retina
TTACAGCAGA (
11
)
7.3
0.0073
E14.5 retina
TTCCTGCCTT (
11
)
5.5
0.0055
E14.5 retina
GCTGGCTGGC
(
10
)
1.8
0.0018
E16.5 retina
TTACAGCAGA (
11
)
14.5
0.0145
E16.5 retina
TTCCTGCCTT (
11
)
5.4
0.0054
E18.5 retina
TTACAGCAGA (
11
)
9.1
0.0091
E18.5 retina
TTCCTGCCTT (
11
)
1.8
0.0018
P0.5 retina
TTACAGCAGA (
11
)
3.9
0.0039
P0.5 retina
GCTGGCTGGC
(
10
)
2
0.002
P2.5 retina
TTCCTGCCTT (
11
)
3.5
0.0035
P2.5 retina
TTACAGCAGA (
11
)
1.8
0.0018
P4.5 retina
TTACAGCAGA (
11
)
11.9
0.0119
P4.5 retina
TTCCTGCCTT (
11
)
4
0.004
P6.5 retina
TTCCTGCCTT (
11
)
8.3
0.0083
P6.5 retina
TTACAGCAGA (
11
)
1.7
0.0017
P10.5 crx- retina
TTACAGCAGA (
11
)
26
0.026
P10.5 crx+ retina
TTACAGCAGA (
11
)
9.6
0.0096
P10.5 crx+ retina
GCTGGCTGGC
(
10
)
3.8
0.0038
P10.5 crx+ retina
TTCCTGCCTT (
11
)
1.9
0.0019
Adult retinal
TTCCTGCCTT (
11
)
24.1
0.0241
Adult retinal
TTACAGCAGA (
11
)
11.1
0.0111
Adult retinal
GTGTTTCATC (
2
)
1.9
0.0019
ONL
TTCCTGCCTT (
11
)
13.4
0.0134
ONL
TTACAGCAGA (
11
)
7.7
0.0077
ONL
GTGTTTCATC (
2
)
3.8
0.0038
