Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.7373	Per1	period homolog 1 (Drosophila)	11		18626
Gene Ontology	circadian rhythm | nucleus | regulation of transcription, DNA-dependent | rhythmic behavior | signal transducer activity | signal transduction
Human Homolog	PER1[period homolog 1 (Drosophila)]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 45 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC CCAGCCCTGG (7) 6.5 0.0065 P8 Cb GC GAGTCCCTGG (3) 3.3 0.0033 P8 Cb GC TTGGGGTTCT (4) 3.3 0.0033 Cb medulloblastoma CCAGCCCTGG (7) 2.3 0.0023 P8 GC+1d culture CCAGCCCTGG (7) 2.3 0.0023 P8 GC+1d culture CCAGCCTGGA (4) 1.1 0.0011 P8 GC+1d culture GAGTCCCTGG (3) 1.1 0.0011 P8 GC+SHH+1d culture CCAGCCCTGG (7) 5.9 0.0059 P8 GC+SHH+1d culture GAGTCCCTGG (3) 2.3 0.0023 P8 GC+SHH+1d culture GAGGAAGAAG (9) 1.2 0.0012 3T3 fibroblasts CCAGCCCTGG (7) 3.5 0.0035 E15 cortex CCAGCCCTGG (7) 9.9 0.0099 E15 cortex GAGGAAGAAG (9) 4.9 0.0049 P1 cortex GAGTCCCTGG (3) 4.5 0.0045 Hypothalamus GAGTCCCTGG (3) 3.6 0.0036 Hypothalamus CCAGCCCTGG (7) 1.8 0.0018 E12.5 retina CCAGCCCTGG (7) 1.9 0.0019 E12.5 retina GTGACTCACG 1.9 0.0019 E14.5 retina CCAGCCCTGG (7) 1.8 0.0018 E14.5 retina GAGTCCCTGG (3) 1.8 0.0018 E16.5 retina GAGGAAGAAG (9) 1.8 0.0018 E16.5 retina GAGTCCCTGG (3) 1.8 0.0018 E16.5 retina GTGACTCACG 1.8 0.0018 E18.5 retina CCAGCCCTGG (7) 1.8 0.0018 P0.5 retina CCAGCCCTGG (7) 5.9 0.0059 P0.5 retina GAGTCCCTGG (3) 3.9 0.0039 P0.5 retina TAACTGTGCC (5) 3.9 0.0039 P2.5 retina CCAGCCCTGG (7) 5.3 0.0053 P2.5 retina CCAGCCTGGA (4) 1.8 0.0018 P2.5 retina GAGTCCCTGG (3) 1.8 0.0018 P4.5 retina CCAGCCCTGG (7) 4 0.004 P4.5 retina CCAGCCTGGA (4) 2 0.002 P4.5 retina TAACTGTGCC (5) 2 0.002 P6.5 retina CCAGCCCTGG (7) 5 0.005 P6.5 retina GAGTCCCTGG (3) 5 0.005 P6.5 retina TTGGGGTTCT (4) 1.7 0.0017 P10.5 crx- retina CCAGCCCTGG (7) 3.7 0.0037 P10.5 crx- retina GAGTCCCTGG (3) 3.7 0.0037 P10.5 crx- retina GTGACTCACG 1.9 0.0019 P10.5 crx+ retina CCAGCCCTGG (7) 5.8 0.0058 Adult retinal GAGTCCCTGG (3) 5.6 0.0056 Adult retinal CCAGCCCTGG (7) 1.9 0.0019 Adult retinal CCAGCCTGGA (4) 1.9 0.0019 Adult retinal TTGGGGTTCT (4) 1.9 0.0019 ONL GAGTCCCTGG (3) 3.8 0.0038