Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.7420	Tubb4	tubulin, beta 4	17	17 34.5 cM	22153
Gene Ontology	cilium | GTP binding | GTPase activity | microtubule | microtubule polymerization | microtubule-based movement | microtubule-based process | structural constituent of cytoskeleton | structural molecule activity | tubulin
Human Homolog	TUBB5[tubulin, beta, 5]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 70 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AGTGGAGTCA (2) 4.9 0.0049 P8 Cb GC AATGGAGTCA (3) 3.3 0.0033 P8 Cb GC GACGAGATGG (9) 3.3 0.0033 P8 Cb GC CCCAGATATT 1.6 0.0016 P8 Cb GC CTCTGTTTTT (5) 1.6 0.0016 P8 Cb GC TACACACACA (29) 1.6 0.0016 Cb medulloblastoma CCCAGATATT 6.9 0.0069 Cb medulloblastoma AATGGAGTCA (3) 2.3 0.0023 Cb medulloblastoma AGGGCCAAGC (2) 2.3 0.0023 Cb medulloblastoma GACGAGATGG (9) 2.3 0.0023 Cb medulloblastoma TACACACACA (29) 2.3 0.0023 Cb medulloblastoma TACACACGCA (5) 2.3 0.0023 P8 GC+1d culture CCCAGATATT 4.6 0.0046 P8 GC+1d culture CTCTGTTTTT (5) 1.1 0.0011 P8 GC+SHH+1d culture CCCAGATATT 4.7 0.0047 P8 GC+SHH+1d culture TACACACGCA (5) 1.2 0.0012 3T3 fibroblasts TACACACGCA (5) 3.5 0.0035 E15 cortex GACGAGATGG (9) 9.9 0.0099 E15 cortex CTCTGTTTTT (5) 4.9 0.0049 P1 cortex CCCAGATATT 9.1 0.0091 P1 cortex TACACACGCA (5) 4.5 0.0045 Hypothalamus AGGGCCAAGC (2) 7.2 0.0072 Hypothalamus TACACACACA (29) 7.2 0.0072 Hypothalamus TACACACGCA (5) 3.6 0.0036 Hypothalamus CTCTGTTTTT (5) 1.8 0.0018 E12.5 retina AGGGCCAAGC (2) 1.9 0.0019 E12.5 retina CCCAGATATT 1.9 0.0019 E12.5 retina CTCTGTTTTT (5) 1.9 0.0019 E12.5 retina TACACACACA (29) 1.9 0.0019 E14.5 retina AATGGAGTCA (3) 7.3 0.0073 E14.5 retina TACACACACA (29) 5.5 0.0055 E14.5 retina GACGAGATGG (9) 3.6 0.0036 E14.5 retina TACACACGCA (5) 1.8 0.0018 E16.5 retina AATGGAGTCA (3) 10.9 0.0109 E16.5 retina GACGAGATGG (9) 7.2 0.0072 E16.5 retina CCCAGATATT 5.4 0.0054 E16.5 retina TACACACACA (29) 3.6 0.0036 E16.5 retina TACACACGCA (5) 3.6 0.0036 E18.5 retina AATGGAGTCA (3) 5.5 0.0055 E18.5 retina GACGAGATGG (9) 3.6 0.0036 E18.5 retina CCCAGATATT 1.8 0.0018 E18.5 retina TACACACACA (29) 1.8 0.0018 P0.5 retina TACACACACA (29) 5.9 0.0059 P0.5 retina AATGGAGTCA (3) 2 0.002 P0.5 retina CCCAGATATT 2 0.002 P0.5 retina GCCAGGATTC (3) 2 0.002 P0.5 retina TACACACGCA (5) 2 0.002 P2.5 retina CCCAGATATT 1.8 0.0018 P2.5 retina CTCTGTTTTT (5) 1.8 0.0018 P4.5 retina TACACACACA (29) 4 0.004 P4.5 retina AATGGAGTCA (3) 2 0.002 P4.5 retina CTCTGTTTTT (5) 2 0.002 P4.5 retina GCCAGGATTC (3) 2 0.002 P6.5 retina CCCAGATATT 3.3 0.0033 P6.5 retina TACACACACA (29) 3.3 0.0033 P6.5 retina CTCTGTTTTT (5) 1.7 0.0017 P6.5 retina GACGAGATGG (9) 1.7 0.0017 P6.5 retina TACACACGCA (5) 1.7 0.0017 P10.5 crx- retina TACACACGCA (5) 5.6 0.0056 P10.5 crx- retina CTCTGTTTTT (5) 3.7 0.0037 P10.5 crx- retina TACACACACA (29) 3.7 0.0037 P10.5 crx- retina CCCAGATATT 1.9 0.0019 P10.5 crx- retina GCCAGGATTC (3) 1.9 0.0019 P10.5 crx+ retina TACACACGCA (5) 3.8 0.0038 P10.5 crx+ retina AGGGCCAAGC (2) 1.9 0.0019 P10.5 crx+ retina TACACACACA (29) 1.9 0.0019 Adult retinal CCCAGATATT 7.4 0.0074 Adult retinal TACACACACA (29) 5.6 0.0056 ONL TACACACACA (29) 13.4 0.0134 ONL TACACACGCA (5) 1.9 0.0019