Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.74208	Pphln1	periphilin 1	15		223828
Gene Ontology	nucleus
Human Homolog	PPHLN1[periphilin 1]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 46 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TTTGTAAGTT (2) 3.3 0.0033 P8 Cb GC GACCAAAATA (2) 1.6 0.0016 P8 Cb GC GGTATAAAAA (3) 1.6 0.0016 Cb medulloblastoma TTTTTTGTTT (10) 2.3 0.0023 P8 GC+1d culture TTTGTAAGTT (2) 5.7 0.0057 P8 GC+1d culture TTTTTTGTTT (10) 2.3 0.0023 P8 GC+1d culture AATTTTAGAT 1.1 0.0011 P8 GC+1d culture GACCAAAAAT (10) 1.1 0.0011 P8 GC+SHH+1d culture TTTGTAAGTT (2) 2.3 0.0023 P8 GC+SHH+1d culture GGCTCTGGGG (5) 1.2 0.0012 P8 GC+SHH+1d culture TTTTTTGTTT (10) 1.2 0.0012 E15 cortex TTTTTTGTTT (10) 4.9 0.0049 P1 cortex TTTGTAAGTT (2) 4.5 0.0045 P1 cortex TTTTTTGTTT (10) 4.5 0.0045 Hypothalamus AATTTTAGAT 1.8 0.0018 Hypothalamus GACCAAAAAT (10) 1.8 0.0018 E12.5 retina TCGTCAATTA 3.8 0.0038 E12.5 retina TTTTTTGTTT (10) 3.8 0.0038 E12.5 retina GACCAAAAAT (10) 1.9 0.0019 E14.5 retina GACCAAAAAT (10) 3.6 0.0036 E14.5 retina GACCAAAATA (2) 1.8 0.0018 E14.5 retina TTTGTAAGTT (2) 1.8 0.0018 E16.5 retina GACCAAAAAT (10) 3.6 0.0036 E16.5 retina TTTGTAAGTT (2) 1.8 0.0018 E16.5 retina TTTTTTGTTT (10) 1.8 0.0018 E18.5 retina GACCAAAAAT (10) 1.8 0.0018 P0.5 retina GACCAAAAAT (10) 7.9 0.0079 P2.5 retina GACCAAAAAT (10) 10.6 0.0106 P2.5 retina TTTGTAAGTT (2) 7 0.007 P4.5 retina GACCAAAAAT (10) 5.9 0.0059 P4.5 retina TTTGTAAGTT (2) 2 0.002 P4.5 retina TTTTTTGTTT (10) 2 0.002 P6.5 retina TTTGTAAGTT (2) 3.3 0.0033 P6.5 retina GGCTCTGGGG (5) 1.7 0.0017 P6.5 retina GGTATAAAAA (3) 1.7 0.0017 P10.5 crx- retina TTTGTAAGTT (2) 3.7 0.0037 P10.5 crx- retina GACCAAAAAT (10) 1.9 0.0019 P10.5 crx+ retina GACCAAAAAT (10) 1.9 0.0019 P10.5 crx+ retina TTTGTAAGTT (2) 1.9 0.0019 P10.5 crx+ retina TTTTTTGTTT (10) 1.9 0.0019 Adult retinal GACCAAAATA (2) 1.9 0.0019 Adult retinal GGCTCTGGGG (5) 1.9 0.0019 Adult retinal GGTATAAAAA (3) 1.9 0.0019 ONL GACCAAAAAT (10) 1.9 0.0019 ONL TCGTCAATTA 1.9 0.0019 ONL TTTGTAAGTT (2) 1.9 0.0019