Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.7454	Igbp1	immunoglobulin (CD79A) binding protein 1	X		18518
Gene Ontology	B-cell activation | regulation of signal transduction | response to biotic stimulus
Human Homolog	IGBP1[immunoglobulin (CD79A) binding protein 1]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 96 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AAGACAAAGC (3) 17.9 0.0179 P8 Cb GC GCCTATCCAA (2) 14.7 0.0147 P8 Cb GC AAACCCTTCA (2) 3.3 0.0033 P8 Cb GC CCAGAAGGCC (3) 1.6 0.0016 Cb medulloblastoma GCCTATCCAA (2) 46.2 0.0462 Cb medulloblastoma AAGACAAAGC (3) 13.9 0.0139 Cb medulloblastoma AAACCCTTCA (2) 4.6 0.0046 Cb medulloblastoma CCAGAAGGCC (3) 4.6 0.0046 Cb medulloblastoma TGTTTGTGTG (10) 2.3 0.0023 P8 GC+1d culture GCCTATCCAA (2) 26.3 0.0263 P8 GC+1d culture AAGACAAAGC (3) 9.1 0.0091 P8 GC+1d culture CCAGAAGGCC (3) 3.4 0.0034 P8 GC+1d culture AAACCCTTCA (2) 2.3 0.0023 P8 GC+1d culture GGCTTGTTAT (3) 1.1 0.0011 P8 GC+SHH+1d culture GCCTATCCAA (2) 16.4 0.0164 P8 GC+SHH+1d culture AAGACAAAGC (3) 3.5 0.0035 P8 GC+SHH+1d culture CCAGAAGGCC (3) 3.5 0.0035 P8 GC+SHH+1d culture CCAGAAGCCA (4) 2.3 0.0023 P8 GC+SHH+1d culture AAACCCTTCA (2) 1.2 0.0012 3T3 fibroblasts CCAGAAGGCC (3) 21 0.021 3T3 fibroblasts AAGACAAAGC (3) 10.5 0.0105 3T3 fibroblasts CCAGAAGCCA (4) 3.5 0.0035 3T3 fibroblasts GCCTATCCAA (2) 3.5 0.0035 E15 cortex AAGACAAAGC (3) 9.9 0.0099 E15 cortex CCAGAAGGCC (3) 9.9 0.0099 E15 cortex AAACCCTTCA (2) 4.9 0.0049 E15 cortex CCAGAAGCCA (4) 4.9 0.0049 P1 cortex AAGACAAAGC (3) 18.2 0.0182 P1 cortex GCCTATCCAA (2) 18.2 0.0182 Hypothalamus GCCTATCCAA (2) 30.8 0.0308 Hypothalamus AAGACAAAGC (3) 12.7 0.0127 Hypothalamus CCAGAAGGCC (3) 1.8 0.0018 Hypothalamus TGTTTGTGTG (10) 1.8 0.0018 E12.5 retina AAGACAAAGC (3) 16.9 0.0169 E12.5 retina GCCTATCCAA (2) 7.5 0.0075 E12.5 retina CCAGAAGGCC (3) 3.8 0.0038 E12.5 retina AAACCCTTCA (2) 1.9 0.0019 E12.5 retina CCAGAAGCCA (4) 1.9 0.0019 E14.5 retina GCCTATCCAA (2) 18.2 0.0182 E14.5 retina AAGACAAAGC (3) 10.9 0.0109 E14.5 retina CCAGAAGCCA (4) 3.6 0.0036 E14.5 retina AAACCCTTCA (2) 1.8 0.0018 E14.5 retina TGTTTGTGTG (10) 1.8 0.0018 E16.5 retina GCCTATCCAA (2) 23.5 0.0235 E16.5 retina AAGACAAAGC (3) 10.9 0.0109 E16.5 retina CCAGAAGCCA (4) 3.6 0.0036 E16.5 retina GGCTATCCAA (2) 1.8 0.0018 E18.5 retina GCCTATCCAA (2) 12.7 0.0127 E18.5 retina AAGACAAAGC (3) 3.6 0.0036 E18.5 retina CCAGAAGCCA (4) 1.8 0.0018 E18.5 retina GACCAGGAAA (4) 1.8 0.0018 E18.5 retina GGCTTGTTAT (3) 1.8 0.0018 P0.5 retina GCCTATCCAA (2) 21.6 0.0216 P0.5 retina AAGACAAAGC (3) 5.9 0.0059 P0.5 retina CCAGAAGGCC (3) 5.9 0.0059 P0.5 retina GACCAGGAAA (4) 2 0.002 P0.5 retina GGCTTGTTAT (3) 2 0.002 P2.5 retina GCCTATCCAA (2) 17.6 0.0176 P2.5 retina AAGACAAAGC (3) 10.6 0.0106 P2.5 retina GGCTTGTTAT (3) 3.5 0.0035 P2.5 retina AAACCCTTCA (2) 1.8 0.0018 P2.5 retina GGCTATCCAA (2) 1.8 0.0018 P2.5 retina TGTTTGTGTG (10) 1.8 0.0018 P4.5 retina AAGACAAAGC (3) 19.8 0.0198 P4.5 retina GCCTATCCAA (2) 9.9 0.0099 P4.5 retina AAACCCTTCA (2) 4 0.004 P4.5 retina CCAGAAGCCA (4) 4 0.004 P4.5 retina CCAGAAGGCC (3) 2 0.002 P4.5 retina GACCAGGAAA (4) 2 0.002 P4.5 retina TGTTTGTGTG (10) 2 0.002 P6.5 retina AAGACAAAGC (3) 18.3 0.0183 P6.5 retina GCCTATCCAA (2) 10 0.01 P6.5 retina CCAGAAGCCA (4) 8.3 0.0083 P6.5 retina GGCTTGTTAT (3) 3.3 0.0033 P6.5 retina GGCTATCCAA (2) 1.7 0.0017 P6.5 retina TGTTTGTGTG (10) 1.7 0.0017 P10.5 crx- retina GCCTATCCAA (2) 31.6 0.0316 P10.5 crx- retina AAGACAAAGC (3) 11.1 0.0111 P10.5 crx- retina CCAGAAGGCC (3) 7.4 0.0074 P10.5 crx- retina AAACCCTTCA (2) 1.9 0.0019 P10.5 crx- retina CCAGAAGCCA (4) 1.9 0.0019 P10.5 crx- retina GGCTTGTTAT (3) 1.9 0.0019 P10.5 crx+ retina GCCTATCCAA (2) 32.7 0.0327 P10.5 crx+ retina AAGACAAAGC (3) 25 0.025 P10.5 crx+ retina AAACCCTTCA (2) 5.8 0.0058 P10.5 crx+ retina CCAGAAGCCA (4) 1.9 0.0019 P10.5 crx+ retina CCAGAAGGCC (3) 1.9 0.0019 P10.5 crx+ retina GGCTATCCAA (2) 1.9 0.0019 P10.5 crx+ retina GGCTTGTTAT (3) 1.9 0.0019 Adult retinal GCCTATCCAA (2) 13 0.013 Adult retinal AAGACAAAGC (3) 5.6 0.0056 Adult retinal CCAGAAGCCA (4) 1.9 0.0019 Adult retinal GGCTTGTTAT (3) 1.9 0.0019 ONL AAGACAAAGC (3) 7.7 0.0077 ONL CCAGAAGCCA (4) 1.9 0.0019 ONL GCCTATCCAA (2) 1.9 0.0019