Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.757	Rhoa	ras homolog gene family, member A	2	2 37.0 cM	11848
Gene Ontology	actin cytoskeleton organization and biogenesis | cell adhesion | cell differentiation | cell growth and/or maintenance | cell-matrix adhesion | cytoskeleton | cytosol | cytosol | GTP binding | GTPase activity | integrin-mediated signaling pathway | myogenesis | Rho protein signal transduction | Rho protein signal transduction | small GTPase mediated signal transduction
Human Homolog	RHOA[ras homolog gene family, member A]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 81 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TTAGTTACCT 19.6 0.0196 P8 Cb GC CGGTTAATTT 1.6 0.0016 P8 Cb GC GCTTGGCTCC (3) 1.6 0.0016 P8 Cb GC GGTGTTCAGG (2) 1.6 0.0016 Cb medulloblastoma GGTGTTCAGG (2) 2.3 0.0023 Cb medulloblastoma TTAGTTACCT 2.3 0.0023 P8 GC+1d culture TTAGTTACCT 29.7 0.0297 P8 GC+1d culture GCTTGGCTCC (3) 3.4 0.0034 P8 GC+1d culture AGCTGGTGAA (3) 2.3 0.0023 P8 GC+1d culture AGTGTCAGCA (3) 1.1 0.0011 P8 GC+1d culture GGTGTTCAGG (2) 1.1 0.0011 P8 GC+SHH+1d culture TTAGTTACCT 19.9 0.0199 P8 GC+SHH+1d culture AGTGTCAGCA (3) 1.2 0.0012 P8 GC+SHH+1d culture GAGTGTTCAG 1.2 0.0012 P8 GC+SHH+1d culture GCTTGGCTCC (3) 1.2 0.0012 P8 GC+SHH+1d culture GGTGTTCAGG (2) 1.2 0.0012 3T3 fibroblasts TTAGTTACCT 7 0.007 3T3 fibroblasts GCTTGGCTCC (3) 3.5 0.0035 E15 cortex GCTTGGCTCC (3) 9.9 0.0099 E15 cortex GGTGTTCAGG (2) 9.9 0.0099 E15 cortex TCCTGCCTAC 4.9 0.0049 P1 cortex GCTTGGCTCC (3) 4.5 0.0045 Hypothalamus TTAGTTACCT 10.9 0.0109 Hypothalamus TCCTGCCTAC 5.4 0.0054 Hypothalamus AGTGTCAGCA (3) 1.8 0.0018 Hypothalamus CGGTTAATTT 1.8 0.0018 Hypothalamus GGGTGTGCAG (2) 1.8 0.0018 E12.5 retina TTAGTTACCT 9.4 0.0094 E12.5 retina GGTGTTCAGG (2) 1.9 0.0019 E14.5 retina TTAGTTACCT 16.4 0.0164 E14.5 retina GGTGTTCAGG (2) 10.9 0.0109 E14.5 retina AGACCACAGA (2) 1.8 0.0018 E14.5 retina AGCTGGTGAA (3) 1.8 0.0018 E14.5 retina CGGTTAATTT 1.8 0.0018 E14.5 retina GCTTGGCTCC (3) 1.8 0.0018 E14.5 retina GGACACAGCT (4) 1.8 0.0018 E14.5 retina TCCTGCCTAC 1.8 0.0018 E16.5 retina GGTGTTCAGG (2) 7.2 0.0072 E16.5 retina TTAGTTACCT 5.4 0.0054 E16.5 retina GCTTGGCTCC (3) 3.6 0.0036 E16.5 retina AGTGTCAGCA (3) 1.8 0.0018 E16.5 retina GAGTGTTCAG 1.8 0.0018 E16.5 retina GGACACAGCT (4) 1.8 0.0018 E16.5 retina TCCTGCCTAC 1.8 0.0018 E18.5 retina TTAGTTACCT 18.2 0.0182 E18.5 retina GGGTGTGCAG (2) 1.8 0.0018 P0.5 retina GGTGTTCAGG (2) 9.8 0.0098 P0.5 retina TTAGTTACCT 9.8 0.0098 P0.5 retina GCTTGGCTCC (3) 3.9 0.0039 P0.5 retina AGACCACAGA (2) 2 0.002 P2.5 retina GCTTGGCTCC (3) 5.3 0.0053 P2.5 retina GGGTGTGCAG (2) 3.5 0.0035 P2.5 retina TTAGTTACCT 3.5 0.0035 P2.5 retina AGTGTCAGCA (3) 1.8 0.0018 P2.5 retina GAGTGTTCAG 1.8 0.0018 P4.5 retina TTAGTTACCT 7.9 0.0079 P4.5 retina GCTTGGCTCC (3) 5.9 0.0059 P4.5 retina GGGTGTGCAG (2) 5.9 0.0059 P6.5 retina TTAGTTACCT 11.7 0.0117 P6.5 retina GCTTGGCTCC (3) 5 0.005 P6.5 retina GGGTGTGCAG (2) 3.3 0.0033 P6.5 retina AGTGTCAGCA (3) 1.7 0.0017 P6.5 retina CGGTTAATTT 1.7 0.0017 P6.5 retina GGTGTTCAGG (2) 1.7 0.0017 P6.5 retina TCCTGCCTAC 1.7 0.0017 P10.5 crx- retina TTAGTTACCT 7.4 0.0074 P10.5 crx- retina GCTTGGCTCC (3) 3.7 0.0037 P10.5 crx- retina GGACACAGCT (4) 1.9 0.0019 P10.5 crx- retina GGGTGTGCAG (2) 1.9 0.0019 P10.5 crx+ retina GCTTGGCTCC (3) 3.8 0.0038 P10.5 crx+ retina GGGTGTGCAG (2) 3.8 0.0038 P10.5 crx+ retina TTAGTTACCT 3.8 0.0038 P10.5 crx+ retina AGTGTCAGCA (3) 1.9 0.0019 P10.5 crx+ retina TCCTGCCTAC 1.9 0.0019 Adult retinal GCTTGGCTCC (3) 5.6 0.0056 Adult retinal GGGTGTGCAG (2) 3.7 0.0037 Adult retinal TTAGTTACCT 1.9 0.0019 ONL TTAGTTACCT 11.5 0.0115 ONL AGACCACAGA (2) 1.9 0.0019 ONL GCTTGGCTCC (3) 1.9 0.0019 ONL GGTGTTCAGG (2) 1.9 0.0019