Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.7598
Hr
hairless
14
14 39.5 cM
15460
Gene Ontology
DNA binding
|
nucleus
|
regulation of transcription, DNA-dependent
Human Homolog
HR[hairless homolog (mouse)]
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 38 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
GGGGAGGGGT
(
7
)
1.6
0.0016
Cb medulloblastoma
GGCTTTGGTC (
3
)
143.4
0.1434
Cb medulloblastoma
TGGCAGAAAA (
2
)
4.6
0.0046
Cb medulloblastoma
GCCCTTCTGG
(
11
)
2.3
0.0023
Cb medulloblastoma
GGGGAGGGGT
(
7
)
2.3
0.0023
Cb medulloblastoma
GGGGGAGGGG (
18
)
2.3
0.0023
P8 GC+1d culture
GCCCTTCTGG
(
11
)
3.4
0.0034
P8 GC+1d culture
GGGGGAGGGG (
18
)
2.3
0.0023
P8 GC+SHH+1d culture
GGGGAGGGGT
(
7
)
2.3
0.0023
P8 GC+SHH+1d culture
TGGCAGAAAA (
2
)
2.3
0.0023
P8 GC+SHH+1d culture
GGCTTTGGTC (
3
)
1.2
0.0012
3T3 fibroblasts
GGGGAGGGGT
(
7
)
3.5
0.0035
3T3 fibroblasts
GGGGGAGGGG (
18
)
3.5
0.0035
E15 cortex
GGGGAGGGGT
(
7
)
4.9
0.0049
P1 cortex
GGGGGAGGGG (
18
)
4.5
0.0045
Hypothalamus
GGGGAGGGGT
(
7
)
3.6
0.0036
E12.5 retina
GGCTTTGGTC (
3
)
5.6
0.0056
E12.5 retina
GGGGGAGGGG (
18
)
3.8
0.0038
E14.5 retina
GGCTTTGGTC (
3
)
10.9
0.0109
E14.5 retina
GGGGAGGGGT
(
7
)
1.8
0.0018
E16.5 retina
GGGGAGGGGT
(
7
)
1.8
0.0018
E18.5 retina
GGGGGAGGGG (
18
)
1.8
0.0018
P2.5 retina
GGCTTTGGTC (
3
)
1.8
0.0018
P2.5 retina
GGGGGAGGGG (
18
)
1.8
0.0018
P4.5 retina
GGCTTTGGTC (
3
)
4
0.004
P6.5 retina
GCCCTTCTGG
(
11
)
5
0.005
P6.5 retina
GGGGGAGGGG (
18
)
1.7
0.0017
P10.5 crx- retina
GGCTTTGGTC (
3
)
358.6
0.3586
P10.5 crx- retina
GCCCTTCTGG
(
11
)
5.6
0.0056
P10.5 crx- retina
GGGGGAGGGG (
18
)
1.9
0.0019
P10.5 crx+ retina
GGCTTTGGTC (
3
)
355.7
0.3557
P10.5 crx+ retina
GCCCTTCTGG
(
11
)
1.9
0.0019
P10.5 crx+ retina
GGGGGAGGGG (
18
)
1.9
0.0019
Adult retinal
GCCCTTCTGG
(
11
)
7.4
0.0074
Adult retinal
GGCTTTGGTC (
3
)
1.9
0.0019
Adult retinal
GGGGGAGGGG (
18
)
1.9
0.0019
ONL
GGCTTTGGTC (
3
)
57.5
0.0575
ONL
GCCCTTCTGG
(
11
)
1.9
0.0019
