Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.7688	Kif3c	kinesin family member 3C	12	12 4.0 cM	16570
Gene Ontology	ATP binding | kinesin complex | microtubule associated complex | microtubule motor activity | microtubule-based process | motor activity
Human Homolog	KIF3C[kinesin family member 3C]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 109 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC CAAAAAAAAA (157) 47.3 0.0473 P8 Cb GC CAGCTTCATC (5) 17.9 0.0179 P8 Cb GC TTTTTTTTTT (433) 4.9 0.0049 Cb medulloblastoma CAAAAAAAAA (157) 92.5 0.0925 Cb medulloblastoma TAAAAAATAA (7) 13.9 0.0139 Cb medulloblastoma CAGCTTCATC (5) 4.6 0.0046 Cb medulloblastoma GTGGCCGAAG (3) 2.3 0.0023 Cb medulloblastoma TTTTTTTTTT (433) 2.3 0.0023 P8 GC+1d culture CAGCTTCATC (5) 50.2 0.0502 P8 GC+1d culture CAAAAAAAAA (157) 37.7 0.0377 P8 GC+1d culture TTTTTTTTTT (433) 13.7 0.0137 P8 GC+1d culture TAAAAAATAA (7) 8 0.008 P8 GC+1d culture TTCTCATCAC 2.3 0.0023 P8 GC+1d culture GTGCTACACA (6) 1.1 0.0011 P8 GC+SHH+1d culture CAAAAAAAAA (157) 58.5 0.0585 P8 GC+SHH+1d culture CAGCTTCATC (5) 23.4 0.0234 P8 GC+SHH+1d culture TAAAAAATAA (7) 9.4 0.0094 P8 GC+SHH+1d culture TTTTTTTTTT (433) 5.9 0.0059 P8 GC+SHH+1d culture CCATCTTTGT (4) 2.3 0.0023 P8 GC+SHH+1d culture GTGCTACACA (6) 1.2 0.0012 P8 GC+SHH+1d culture GTGGCCGAAG (3) 1.2 0.0012 E15 cortex CAAAAAAAAA (157) 34.6 0.0346 E15 cortex GTCAGGTTCA (2) 4.9 0.0049 E15 cortex TAAAAAATAA (7) 4.9 0.0049 E15 cortex TTCTCATCAC 4.9 0.0049 E15 cortex TTTTTTTTTT (433) 4.9 0.0049 P1 cortex CAAAAAAAAA (157) 22.7 0.0227 P1 cortex TTCTCATCAC 13.6 0.0136 P1 cortex AGTCACCCCA 4.5 0.0045 P1 cortex GTGCTACACA (6) 4.5 0.0045 P1 cortex GTGGCCGAAG (3) 4.5 0.0045 P1 cortex TTTTTTTTTT (433) 4.5 0.0045 Hypothalamus CAAAAAAAAA (157) 39.8 0.0398 Hypothalamus TAAAAAATAA (7) 23.5 0.0235 Hypothalamus TTTTTTTTTT (433) 7.2 0.0072 Hypothalamus TTCTCATCAC 1.8 0.0018 E12.5 retina CAAAAAAAAA (157) 22.5 0.0225 E12.5 retina TTTTTTTTTT (433) 7.5 0.0075 E12.5 retina CAGCTTCATC (5) 3.8 0.0038 E12.5 retina TAAAAAATAA (7) 3.8 0.0038 E14.5 retina TTTTTTTTTT (433) 23.7 0.0237 E14.5 retina CAAAAAAAAA (157) 9.1 0.0091 E14.5 retina TAAAAAATAA (7) 5.5 0.0055 E14.5 retina CAGCTTCATC (5) 1.8 0.0018 E14.5 retina GTCAGGTTCA (2) 1.8 0.0018 E14.5 retina GTGGCCACAC (4) 1.8 0.0018 E16.5 retina CAAAAAAAAA (157) 9.1 0.0091 E16.5 retina TAAAAAATAA (7) 5.4 0.0054 E16.5 retina TTTTTTTTTT (433) 5.4 0.0054 E16.5 retina CAGCTTCATC (5) 3.6 0.0036 E16.5 retina AGTCACCCCA 1.8 0.0018 E16.5 retina CCATCTTTGT (4) 1.8 0.0018 E16.5 retina TTCTCATCAC 1.8 0.0018 E18.5 retina CAAAAAAAAA (157) 41.8 0.0418 E18.5 retina TAAAAAATAA (7) 18.2 0.0182 E18.5 retina CAGCTTCATC (5) 10.9 0.0109 E18.5 retina TTTTTTTTTT (433) 10.9 0.0109 E18.5 retina CCATCTTTGT (4) 1.8 0.0018 P0.5 retina CAAAAAAAAA (157) 137.4 0.1374 P0.5 retina TTTTTTTTTT (433) 9.8 0.0098 P0.5 retina CAGCTTCATC (5) 3.9 0.0039 P0.5 retina TTCTCATCAC 3.9 0.0039 P0.5 retina AGTCACCCCA 2 0.002 P0.5 retina CAGGGGACCT (3) 2 0.002 P0.5 retina GTGCTACACA (6) 2 0.002 P0.5 retina TAAAAAATAA (7) 2 0.002 P2.5 retina CAAAAAAAAA (157) 52.8 0.0528 P2.5 retina CAGCTTCATC (5) 15.8 0.0158 P2.5 retina TTTTTTTTTT (433) 7 0.007 P2.5 retina TAAAAAATAA (7) 5.3 0.0053 P2.5 retina CCATCTTTGT (4) 3.5 0.0035 P2.5 retina GTGGCCACAC (4) 1.8 0.0018 P2.5 retina TTCTCATCAC 1.8 0.0018 P4.5 retina CAAAAAAAAA (157) 41.6 0.0416 P4.5 retina TAAAAAATAA (7) 19.8 0.0198 P4.5 retina CAGCTTCATC (5) 17.8 0.0178 P4.5 retina TTTTTTTTTT (433) 9.9 0.0099 P4.5 retina AGTCACCCCA 2 0.002 P6.5 retina TAAAAAATAA (7) 33.3 0.0333 P6.5 retina CAAAAAAAAA (157) 31.7 0.0317 P6.5 retina CAGCTTCATC (5) 25 0.025 P6.5 retina TTTTTTTTTT (433) 8.3 0.0083 P10.5 crx- retina CAGCTTCATC (5) 20.4 0.0204 P10.5 crx- retina CAAAAAAAAA (157) 13 0.013 P10.5 crx- retina TACACACATC (2) 3.7 0.0037 P10.5 crx- retina CAGGGGACCT (3) 1.9 0.0019 P10.5 crx- retina CCATCTTTGT (4) 1.9 0.0019 P10.5 crx- retina GTCAGGTTCA (2) 1.9 0.0019 P10.5 crx- retina TAAAAAATAA (7) 1.9 0.0019 P10.5 crx- retina TTCTCATCAC 1.9 0.0019 P10.5 crx+ retina CAAAAAAAAA (157) 32.7 0.0327 P10.5 crx+ retina CAGCTTCATC (5) 7.7 0.0077 P10.5 crx+ retina TAAAAAATAA (7) 5.8 0.0058 P10.5 crx+ retina TTCTCATCAC 3.8 0.0038 P10.5 crx+ retina TTTTTTTTTT (433) 3.8 0.0038 P10.5 crx+ retina GTGGCCACAC (4) 1.9 0.0019 Adult retinal CAAAAAAAAA (157) 20.4 0.0204 Adult retinal CAGCTTCATC (5) 14.8 0.0148 Adult retinal TTTTTTTTTT (433) 7.4 0.0074 Adult retinal AGTCACCCCA 1.9 0.0019 Adult retinal CAGGGGACCT (3) 1.9 0.0019 Adult retinal GTGCTACACA (6) 1.9 0.0019 Adult retinal TAAAAAATAA (7) 1.9 0.0019 Adult retinal TTCTCATCAC 1.9 0.0019 ONL CAAAAAAAAA (157) 17.2 0.0172 ONL TAAAAAATAA (7) 7.7 0.0077 ONL CAGCTTCATC (5) 5.7 0.0057 ONL TTTTTTTTTT (433) 3.8 0.0038 ONL TACACACATC (2) 1.9 0.0019