Mouse Retina SAGE Library
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Gene: 
Accession: 
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag: 
Cytoband (Mm): 
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene: 
Cytoband (Hs): 
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.78250
C330006K01Rik
RIKEN cDNA C330006K01 gene
5
231855
Human Homolog
FOXK1[forkhead box K1]
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 40 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
AGAGAGAGAG (
8
)
6.5
0.0065
P8 Cb GC
ACTGTCAGGA
(
2
)
1.6
0.0016
Cb medulloblastoma
AGAGAGAGAG (
8
)
25.4
0.0254
Cb medulloblastoma
CCTTGGTCAC
(
2
)
2.3
0.0023
P8 GC+1d culture
AGAGAGAGAG (
8
)
3.4
0.0034
P8 GC+1d culture
GGGGAAACCG (
2
)
3.4
0.0034
P8 GC+1d culture
CCTTGGTCAC
(
2
)
1.1
0.0011
P8 GC+SHH+1d culture
AGAGAGAGAG (
8
)
2.3
0.0023
P8 GC+SHH+1d culture
GGAAAGCGGC (
4
)
1.2
0.0012
3T3 fibroblasts
ACTGTCAGGA
(
2
)
3.5
0.0035
E15 cortex
AGAGAGAGAG (
8
)
9.9
0.0099
E15 cortex
ACTGTCAGGA
(
2
)
4.9
0.0049
E15 cortex
GGAAAGCGGC (
4
)
4.9
0.0049
P1 cortex
AGAGAGAGAG (
8
)
4.5
0.0045
P1 cortex
GGGGAAACCG (
2
)
4.5
0.0045
Hypothalamus
AGAGAGAGAG (
8
)
14.5
0.0145
E12.5 retina
ACTGTCAGGA
(
2
)
1.9
0.0019
E12.5 retina
CCTTGGTCAC
(
2
)
1.9
0.0019
E12.5 retina
GGAAAGCGGC (
4
)
1.9
0.0019
E14.5 retina
GGAAAGCGGC (
4
)
3.6
0.0036
E14.5 retina
AGAGAGAGAG (
8
)
1.8
0.0018
E14.5 retina
CCTTGGTCAC
(
2
)
1.8
0.0018
E16.5 retina
AGAGAGAGAG (
8
)
3.6
0.0036
E16.5 retina
ACTGTCAGGA
(
2
)
1.8
0.0018
E16.5 retina
GGAAAGCGGC (
4
)
1.8
0.0018
E18.5 retina
AGAGAGAGAG (
8
)
3.6
0.0036
P0.5 retina
AGAGAGAGAG (
8
)
5.9
0.0059
P0.5 retina
CCTTGGTCAC
(
2
)
2
0.002
P0.5 retina
GGAAAGCGGC (
4
)
2
0.002
P0.5 retina
GGGGAAACCG (
2
)
2
0.002
P2.5 retina
AGAGAGAGAG (
8
)
1.8
0.0018
P2.5 retina
GGAAAGCGGC (
4
)
1.8
0.0018
P4.5 retina
AGAGAGAGAG (
8
)
7.9
0.0079
P4.5 retina
CCTTGGTCAC
(
2
)
2
0.002
P6.5 retina
AGAGAGAGAG (
8
)
5
0.005
P10.5 crx- retina
AGAGAGAGAG (
8
)
9.3
0.0093
P10.5 crx- retina
GGAAAGCGGC (
4
)
1.9
0.0019
P10.5 crx+ retina
AGAGAGAGAG (
8
)
5.8
0.0058
Adult retinal
AGAGAGAGAG (
8
)
9.3
0.0093
ONL
AGAGAGAGAG (
8
)
7.7
0.0077