Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.78875
Cdc37l1
cell division cycle 37 homolog (S. cerevisiae)-like 1
19
67072
Mm.78875
BB159850
expressed sequence BB159850
19
107414
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 99 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
TGTGTGTGTG (
115
)
27.7
0.0277
P8 Cb GC
CTCAGGAAAC (
3
)
1.6
0.0016
P8 Cb GC
GGGGCTCAGA
(
2
)
1.6
0.0016
P8 Cb GC
TCATAAATGG
(
5
)
1.6
0.0016
P8 Cb GC
TGGTAGCTGG (
3
)
1.6
0.0016
Cb medulloblastoma
TGTGTGTGTG (
115
)
30.1
0.0301
Cb medulloblastoma
TAAGAAAAAA
(
12
)
4.6
0.0046
Cb medulloblastoma
GGGGCTCAGA
(
2
)
2.3
0.0023
P8 GC+1d culture
TGTGTGTGTG (
115
)
27.4
0.0274
P8 GC+1d culture
GCCTTTCTGG (
3
)
3.4
0.0034
P8 GC+1d culture
GGGGCTCAGA
(
2
)
2.3
0.0023
P8 GC+1d culture
CTCAGGAAAC (
3
)
1.1
0.0011
P8 GC+1d culture
TAAGAAAAAG (
3
)
1.1
0.0011
P8 GC+SHH+1d culture
TGTGTGTGTG (
115
)
28.1
0.0281
P8 GC+SHH+1d culture
GCTTTAATCC (
11
)
3.5
0.0035
P8 GC+SHH+1d culture
CTCAGGAAAC (
3
)
1.2
0.0012
P8 GC+SHH+1d culture
TATGGCAGTG (
6
)
1.2
0.0012
P8 GC+SHH+1d culture
TGGTAGCTGG (
3
)
1.2
0.0012
3T3 fibroblasts
TGTGTGTGTG (
115
)
28
0.028
3T3 fibroblasts
GGGGCTCAGA
(
2
)
10.5
0.0105
3T3 fibroblasts
GTCATAGCTG (
590
)
10.5
0.0105
E15 cortex
CGCACAGAAG
(
2
)
4.9
0.0049
E15 cortex
GTCATAGCTG (
590
)
4.9
0.0049
P1 cortex
TGTGTGTGTG (
115
)
18.2
0.0182
P1 cortex
GCTTTAATCC (
11
)
4.5
0.0045
P1 cortex
TAAGAAAAAG (
3
)
4.5
0.0045
Hypothalamus
TGTGTGTGTG (
115
)
25.4
0.0254
Hypothalamus
GGGGCTCAGA
(
2
)
1.8
0.0018
Hypothalamus
TAAGAAAAAG (
3
)
1.8
0.0018
Hypothalamus
TAATAAATGG
(
3
)
1.8
0.0018
Hypothalamus
TATGGCAGTG (
6
)
1.8
0.0018
E12.5 retina
TGTGTGTGTG (
115
)
43.2
0.0432
E12.5 retina
TCATAAATGG
(
5
)
3.8
0.0038
E14.5 retina
TGTGTGTGTG (
115
)
54.7
0.0547
E14.5 retina
CGCACAGAAG
(
2
)
3.6
0.0036
E14.5 retina
TGGTAGCTGG (
3
)
3.6
0.0036
E14.5 retina
GAAAATTTAA
(
4
)
1.8
0.0018
E14.5 retina
GCTTTAATCC (
11
)
1.8
0.0018
E14.5 retina
TAAGAAAAAA
(
12
)
1.8
0.0018
E14.5 retina
TCATAAATGG
(
5
)
1.8
0.0018
E16.5 retina
TGTGTGTGTG (
115
)
39.8
0.0398
E16.5 retina
CTTATTAAAT
(
3
)
1.8
0.0018
E16.5 retina
GGGGCTCAGA
(
2
)
1.8
0.0018
E16.5 retina
TAAGAAAAAA
(
12
)
1.8
0.0018
E16.5 retina
TGGTAGCTGG (
3
)
1.8
0.0018
E18.5 retina
TGTGTGTGTG (
115
)
47.3
0.0473
E18.5 retina
CGCACAGAAG
(
2
)
1.8
0.0018
E18.5 retina
CTTATTAAAT
(
3
)
1.8
0.0018
E18.5 retina
GGGGCTCAGA
(
2
)
1.8
0.0018
E18.5 retina
TATGGATACC
(
4
)
1.8
0.0018
E18.5 retina
TGGTAGCTGG (
3
)
1.8
0.0018
P0.5 retina
TGTGTGTGTG (
115
)
21.6
0.0216
P0.5 retina
GCCTTTCTGG (
3
)
3.9
0.0039
P0.5 retina
GTCATAGCTG (
590
)
3.9
0.0039
P0.5 retina
CGCACAGAAG
(
2
)
2
0.002
P0.5 retina
CTTATTAAAT
(
3
)
2
0.002
P0.5 retina
GCTTTAATCC (
11
)
2
0.002
P0.5 retina
GGGGCTCAGA
(
2
)
2
0.002
P0.5 retina
TGGTAGCTGG (
3
)
2
0.002
P2.5 retina
TGTGTGTGTG (
115
)
35.2
0.0352
P2.5 retina
GCTTTAATCC (
11
)
3.5
0.0035
P2.5 retina
GGGGCTCAGA
(
2
)
3.5
0.0035
P2.5 retina
CTCAGGAAAC (
3
)
1.8
0.0018
P2.5 retina
GAAAATTTAA
(
4
)
1.8
0.0018
P2.5 retina
GCCTTTCTGG (
3
)
1.8
0.0018
P2.5 retina
GTCATAGCTG (
590
)
1.8
0.0018
P2.5 retina
TCATAAATGG
(
5
)
1.8
0.0018
P4.5 retina
TGTGTGTGTG (
115
)
47.6
0.0476
P4.5 retina
CGCACAGAAG
(
2
)
4
0.004
P4.5 retina
GCTTTAATCC (
11
)
4
0.004
P4.5 retina
GAAAATTTAA
(
4
)
2
0.002
P4.5 retina
GTCATAGCTG (
590
)
2
0.002
P4.5 retina
TAAGAAAAAA
(
12
)
2
0.002
P6.5 retina
TGTGTGTGTG (
115
)
41.7
0.0417
P6.5 retina
GTCATAGCTG (
590
)
3.3
0.0033
P6.5 retina
CTCAGGAAAC (
3
)
1.7
0.0017
P6.5 retina
GCTTTAATCC (
11
)
1.7
0.0017
P6.5 retina
GGGGCTCAGA
(
2
)
1.7
0.0017
P6.5 retina
TCATAAATGG
(
5
)
1.7
0.0017
P10.5 crx- retina
TGTGTGTGTG (
115
)
59.4
0.0594
P10.5 crx- retina
GGGGCTCAGA
(
2
)
7.4
0.0074
P10.5 crx- retina
CGCACAGAAG
(
2
)
5.6
0.0056
P10.5 crx- retina
TATGGATACC
(
4
)
3.7
0.0037
P10.5 crx+ retina
TGTGTGTGTG (
115
)
44.2
0.0442
P10.5 crx+ retina
GCTTTAATCC (
11
)
3.8
0.0038
P10.5 crx+ retina
CGCACAGAAG
(
2
)
1.9
0.0019
P10.5 crx+ retina
TAAGAAAAAG (
3
)
1.9
0.0019
Adult retinal
TGTGTGTGTG (
115
)
53.7
0.0537
Adult retinal
CGCACAGAAG
(
2
)
5.6
0.0056
Adult retinal
GCTTTAATCC (
11
)
1.9
0.0019
Adult retinal
GTCATAGCTG (
590
)
1.9
0.0019
Adult retinal
TCATAAATGG
(
5
)
1.9
0.0019
Adult retinal
TGGTAGCTGG (
3
)
1.9
0.0019
ONL
TGTGTGTGTG (
115
)
23
0.023
ONL
GTCATAGCTG (
590
)
5.7
0.0057
ONL
TAATAAATGG
(
3
)
3.8
0.0038
ONL
TGGTAGCTGG (
3
)
3.8
0.0038
ONL
CTTATTAAAT
(
3
)
1.9
0.0019
ONL
GCTTTAATCC (
11
)
1.9
0.0019
