Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.79127
1110065P19Rik
RIKEN cDNA 1110065P19 gene
68919
Mm.79127
Dnaic1
dynein, axonemal, intermediate chain 1
4
68922
Mm.79127
2310040A07Rik
RIKEN cDNA 2310040A07 gene
4
69638
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 36 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
CCCTTAAGAA (
7
)
3.3
0.0033
P8 Cb GC
GGGGCAGCCA (
6
)
1.6
0.0016
Cb medulloblastoma
GCAATAATGG
(
4
)
9.2
0.0092
Cb medulloblastoma
CCCTTAAGAA (
7
)
6.9
0.0069
Cb medulloblastoma
AAGGCAGCTA
(
5
)
2.3
0.0023
P8 GC+1d culture
GCAATAATGG
(
4
)
16
0.016
P8 GC+1d culture
CCCTTAAGAA (
7
)
2.3
0.0023
P8 GC+SHH+1d culture
GCAATAATGG
(
4
)
11.7
0.0117
P8 GC+SHH+1d culture
CCCTTAAGAA (
7
)
1.2
0.0012
P8 GC+SHH+1d culture
GGGGCAGCCA (
6
)
1.2
0.0012
P1 cortex
CCCTTAAGAA (
7
)
4.5
0.0045
P1 cortex
GGGGCAGCCA (
6
)
4.5
0.0045
Hypothalamus
GCAATAATGG
(
4
)
19.9
0.0199
E12.5 retina
GCAATAATGG
(
4
)
5.6
0.0056
E14.5 retina
CCCTTAAGAA (
7
)
1.8
0.0018
E14.5 retina
GCAATAATGG
(
4
)
1.8
0.0018
E14.5 retina
GGGGCAGCCA (
6
)
1.8
0.0018
E16.5 retina
GCAATAATGG
(
4
)
7.2
0.0072
E16.5 retina
CCCTTAAGAA (
7
)
3.6
0.0036
E18.5 retina
GCAATAATGG
(
4
)
1.8
0.0018
P0.5 retina
CCCTTAAGAA (
7
)
5.9
0.0059
P0.5 retina
GCAATAATGG
(
4
)
5.9
0.0059
P0.5 retina
GGGGCAGCCA (
6
)
2
0.002
P2.5 retina
GCAATAATGG
(
4
)
21.1
0.0211
P2.5 retina
CCCTTAAGAA (
7
)
1.8
0.0018
P4.5 retina
GCAATAATGG
(
4
)
7.9
0.0079
P4.5 retina
CCCTTAAGAA (
7
)
2
0.002
P6.5 retina
GCAATAATGG
(
4
)
15
0.015
P6.5 retina
CCCTTAAGAA (
7
)
5
0.005
P10.5 crx- retina
GCAATAATGG
(
4
)
18.6
0.0186
P10.5 crx- retina
AAGGCAGCTA
(
5
)
1.9
0.0019
P10.5 crx+ retina
GCAATAATGG
(
4
)
7.7
0.0077
P10.5 crx+ retina
CCCTTAAGAA (
7
)
1.9
0.0019
Adult retinal
GCAATAATGG
(
4
)
11.1
0.0111
Adult retinal
CCCTTAAGAA (
7
)
3.7
0.0037
ONL
AAGGCAGCTA
(
5
)
1.9
0.0019
