Mouse Retina SAGE Library

[Home]    [Libraries]    [Images]

---

Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

---

UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.7919	Hgs	HGF-regulated tyrosine kinase substrate	11	11 E2 (11 75.0 cM)	15239
Gene Ontology	cytoplasm | intracellular protein transport | kinase activity | zinc ion binding
Human Homolog	HGS[hepatocyte growth factor-regulated tyrosine kinase substrate]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

Total 11 In Situ Hybridization Images

Images -- Click to Enlarge

SAGE Tags

Total 64 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TGGCTCCTGC (5) 6.5 0.0065 P8 Cb GC AAGAGGAAGA (4) 3.3 0.0033 P8 Cb GC TATTTCAAAA (14) 3.3 0.0033 P8 Cb GC TCTTCCCTGA (3) 3.3 0.0033 P8 Cb GC GTTCTTCTGG (4) 1.6 0.0016 Cb medulloblastoma TATTTCAAAA (14) 4.6 0.0046 Cb medulloblastoma GTTCTTCTGG (4) 2.3 0.0023 Cb medulloblastoma TGGCTCCTGC (5) 2.3 0.0023 P8 GC+1d culture TGGCTCCTGC (5) 14.8 0.0148 P8 GC+1d culture TATTTCAAAA (14) 2.3 0.0023 P8 GC+1d culture AAGAGGAAGA (4) 1.1 0.0011 P8 GC+1d culture GCTCCCACAC 1.1 0.0011 P8 GC+1d culture GTTCTTCTGG (4) 1.1 0.0011 P8 GC+SHH+1d culture TGGCTCCTGC (5) 14.1 0.0141 P8 GC+SHH+1d culture TATTTCAAAA (14) 2.3 0.0023 P8 GC+SHH+1d culture AAGAGGAAGA (4) 1.2 0.0012 P8 GC+SHH+1d culture TCTTCCCTGA (3) 1.2 0.0012 E15 cortex TGGCTCCTGC (5) 29.7 0.0297 Hypothalamus TGGCTCCTGC (5) 7.2 0.0072 Hypothalamus TATTTCAAAA (14) 3.6 0.0036 Hypothalamus AAGAGGAAGA (4) 1.8 0.0018 Hypothalamus GCTCCCACAC 1.8 0.0018 E12.5 retina GCTCCCACAC 5.6 0.0056 E12.5 retina TGGCTCCTGC (5) 1.9 0.0019 E14.5 retina TATTTCAAAA (14) 5.5 0.0055 E14.5 retina AAGAGGAAGA (4) 3.6 0.0036 E14.5 retina AAGACAGATA 1.8 0.0018 E14.5 retina GGCTACCAGC (2) 1.8 0.0018 E14.5 retina TGGCTCCTGC (5) 1.8 0.0018 E16.5 retina TGGCTCCTGC (5) 3.6 0.0036 E16.5 retina AAGAGGAAGA (4) 1.8 0.0018 E16.5 retina GCTCCCACAC 1.8 0.0018 E16.5 retina GTTCTTCTGG (4) 1.8 0.0018 E16.5 retina TATTTCAAAA (14) 1.8 0.0018 E18.5 retina TGGCTCCTGC (5) 7.3 0.0073 E18.5 retina GCTCCCACAC 3.6 0.0036 E18.5 retina TATTTCAAAA (14) 1.8 0.0018 E18.5 retina TCTTCCCTGA (3) 1.8 0.0018 P0.5 retina TGGCTCCTGC (5) 3.9 0.0039 P2.5 retina TGGCTCCTGC (5) 26.4 0.0264 P2.5 retina TATTTCAAAA (14) 3.5 0.0035 P2.5 retina GCTCCCACAC 1.8 0.0018 P4.5 retina TGGCTCCTGC (5) 7.9 0.0079 P4.5 retina AAGACAGATA 2 0.002 P4.5 retina TATTTCAAAA (14) 2 0.002 P6.5 retina CACCCGCAGC (2) 10 0.01 P6.5 retina TGGCTCCTGC (5) 6.7 0.0067 P6.5 retina TATTTCAAAA (14) 1.7 0.0017 P10.5 crx- retina TGGCTCCTGC (5) 14.9 0.0149 P10.5 crx- retina CACCCGCAGC (2) 11.1 0.0111 P10.5 crx- retina TCTTCCCTGA (3) 3.7 0.0037 P10.5 crx- retina AAGAGGAAGA (4) 1.9 0.0019 P10.5 crx+ retina CACCCGCAGC (2) 40.4 0.0404 P10.5 crx+ retina TGGCTCCTGC (5) 11.5 0.0115 P10.5 crx+ retina AAGACAGATA 1.9 0.0019 P10.5 crx+ retina GTTCTTCTGG (4) 1.9 0.0019 P10.5 crx+ retina TATTTCAAAA (14) 1.9 0.0019 P10.5 crx+ retina TCTTCCCTGA (3) 1.9 0.0019 Adult retinal CACCCGCAGC (2) 16.7 0.0167 Adult retinal TGGCTCCTGC (5) 13 0.013 Adult retinal TATTTCAAAA (14) 1.9 0.0019 ONL CACCCGCAGC (2) 23 0.023 ONL TCTTCCCTGA (3) 3.8 0.0038 ONL TATTTCAAAA (14) 1.9 0.0019