Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.794
Trim41
tripartite motif-containing 41
11
211007
Human Homolog
TRIM41[tripartite motif-containing 41]
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 65 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
AAGCTCAGTT (
3
)
14.7
0.0147
P8 Cb GC
CCTTTATTCC (
18
)
3.3
0.0033
P8 Cb GC
TTCTTGGGGA
(
4
)
3.3
0.0033
Cb medulloblastoma
AAGCTCAGTT (
3
)
6.9
0.0069
Cb medulloblastoma
TTCTTGGGGA
(
4
)
2.3
0.0023
P8 GC+1d culture
AAGCTCAGTT (
3
)
11.4
0.0114
P8 GC+1d culture
TTCTTGGGGA
(
4
)
9.1
0.0091
P8 GC+1d culture
CCTTTATTCC (
18
)
6.8
0.0068
P8 GC+SHH+1d culture
AAGCTCAGTT (
3
)
7
0.007
P8 GC+SHH+1d culture
CCTTTATTCC (
18
)
1.2
0.0012
3T3 fibroblasts
GTCATAGCTG (
590
)
10.5
0.0105
3T3 fibroblasts
AAGCTCAGTT (
3
)
3.5
0.0035
3T3 fibroblasts
GTCCAGGTGA
(
2
)
3.5
0.0035
E15 cortex
AAGCTCAGTT (
3
)
64.3
0.0643
E15 cortex
GTCATAGCTG (
590
)
4.9
0.0049
E15 cortex
GTCCAGGTGA
(
2
)
4.9
0.0049
E15 cortex
TTCTTGGGGA
(
4
)
4.9
0.0049
P1 cortex
CCTTTATTCC (
18
)
27.3
0.0273
P1 cortex
AAGCTCAGTT (
3
)
13.6
0.0136
P1 cortex
TTCTTGGGGA
(
4
)
9.1
0.0091
Hypothalamus
AAGCTCAGTT (
3
)
18.1
0.0181
Hypothalamus
ACACCACATA
1.8
0.0018
E12.5 retina
TTCTTGGGGA
(
4
)
7.5
0.0075
E12.5 retina
CCTTTATTCC (
18
)
5.6
0.0056
E14.5 retina
AAGCTCAGTT (
3
)
16.4
0.0164
E14.5 retina
CCTTTATTCC (
18
)
12.8
0.0128
E14.5 retina
TTCTTGGGGA
(
4
)
7.3
0.0073
E16.5 retina
AAGCTCAGTT (
3
)
16.3
0.0163
E16.5 retina
TTCTTGGGGA
(
4
)
5.4
0.0054
E16.5 retina
ACACCACATA
3.6
0.0036
E16.5 retina
CCTTTATTCC (
18
)
3.6
0.0036
E18.5 retina
AAGCTCAGTT (
3
)
7.3
0.0073
E18.5 retina
CCTTTATTCC (
18
)
7.3
0.0073
E18.5 retina
TTCTTGGGGA
(
4
)
1.8
0.0018
P0.5 retina
AAGCTCAGTT (
3
)
13.7
0.0137
P0.5 retina
GTCATAGCTG (
590
)
3.9
0.0039
P0.5 retina
CCTTTATTCC (
18
)
2
0.002
P2.5 retina
TTCTTGGGGA
(
4
)
7
0.007
P2.5 retina
AAGCTCAGTT (
3
)
3.5
0.0035
P2.5 retina
CCTTTATTCC (
18
)
3.5
0.0035
P2.5 retina
GTCATAGCTG (
590
)
1.8
0.0018
P4.5 retina
TTCTTGGGGA
(
4
)
9.9
0.0099
P4.5 retina
AAGCTCAGTT (
3
)
7.9
0.0079
P4.5 retina
CCTTTATTCC (
18
)
7.9
0.0079
P4.5 retina
GTCATAGCTG (
590
)
2
0.002
P4.5 retina
GTCCAGGTGA
(
2
)
2
0.002
P6.5 retina
TTCTTGGGGA
(
4
)
15
0.015
P6.5 retina
AAGCTCAGTT (
3
)
5
0.005
P6.5 retina
CCTTTATTCC (
18
)
5
0.005
P6.5 retina
GTCATAGCTG (
590
)
3.3
0.0033
P10.5 crx- retina
AAGCTCAGTT (
3
)
24.2
0.0242
P10.5 crx- retina
CCTTTATTCC (
18
)
3.7
0.0037
P10.5 crx- retina
TTCTTGGGGA
(
4
)
1.9
0.0019
P10.5 crx+ retina
CCTTTATTCC (
18
)
7.7
0.0077
P10.5 crx+ retina
AAGCTCAGTT (
3
)
3.8
0.0038
P10.5 crx+ retina
TTCTTGGGGA
(
4
)
3.8
0.0038
Adult retinal
TTCTTGGGGA
(
4
)
5.6
0.0056
Adult retinal
AAGCTCAGTT (
3
)
1.9
0.0019
Adult retinal
CCTTTATTCC (
18
)
1.9
0.0019
Adult retinal
GTCATAGCTG (
590
)
1.9
0.0019
Adult retinal
GTCCAGGTGA
(
2
)
1.9
0.0019
ONL
GTCATAGCTG (
590
)
5.7
0.0057
ONL
TTCTTGGGGA
(
4
)
3.8
0.0038
ONL
CCTTTATTCC (
18
)
1.9
0.0019
ONL
GTCCAGGTGA
(
2
)
1.9
0.0019
