Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.81144	Capn12	calpain 12	7		60594
Gene Ontology	calcium ion binding | calpain activity | cysteine-type endopeptidase activity | cysteine-type peptidase activity | hydrolase activity | intracellular | proteolysis and peptidolysis
Human Homolog	CAPN12[calpain 12]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 40 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TAATATTTTT (2) 1.6 0.0016 Cb medulloblastoma TAATATTTTT (2) 6.9 0.0069 Cb medulloblastoma TGCCTTGTCC (4) 2.3 0.0023 P8 GC+1d culture TAATATTTTT (2) 3.4 0.0034 P8 GC+1d culture TGCCTTGTCC (4) 3.4 0.0034 P8 GC+1d culture CCAGCAGCCT (7) 2.3 0.0023 P8 GC+1d culture TTTTATTCTC (2) 2.3 0.0023 P8 GC+1d culture GGGCTTTGGC (2) 1.1 0.0011 P8 GC+SHH+1d culture TAATATTTTT (2) 9.4 0.0094 P8 GC+SHH+1d culture CCAGCAGCCT (7) 1.2 0.0012 P8 GC+SHH+1d culture GGGCTTTGGC (2) 1.2 0.0012 P8 GC+SHH+1d culture TGCCTTGTCC (4) 1.2 0.0012 3T3 fibroblasts TGCCTTGTCC (4) 17.5 0.0175 P1 cortex TGCCTTGTCC (4) 9.1 0.0091 P1 cortex TTTTATTCTC (2) 4.5 0.0045 Hypothalamus TAATATTTTT (2) 1.8 0.0018 E12.5 retina TAATATTTTT (2) 5.6 0.0056 E12.5 retina GGGCTTTGGC (2) 1.9 0.0019 E12.5 retina TGCCTTGTCC (4) 1.9 0.0019 E14.5 retina TAATATTTTT (2) 5.5 0.0055 E14.5 retina GGGCTTTGGC (2) 1.8 0.0018 E16.5 retina TAATATTTTT (2) 3.6 0.0036 E16.5 retina TGCCTTGTCC (4) 1.8 0.0018 E18.5 retina TAATATTTTT (2) 10.9 0.0109 E18.5 retina GGGCTTTGGC (2) 1.8 0.0018 E18.5 retina TTTTATTCTC (2) 1.8 0.0018 P0.5 retina GGGCTTTGGC (2) 2 0.002 P2.5 retina TAATATTTTT (2) 5.3 0.0053 P2.5 retina GGGCTTTGGC (2) 1.8 0.0018 P4.5 retina TAATATTTTT (2) 4 0.004 P4.5 retina GGGCTTTGGG (5) 2 0.002 P4.5 retina TGCCTTGTCC (4) 2 0.002 P6.5 retina TAATATTTTT (2) 3.3 0.0033 P6.5 retina TTTTATTCTC (2) 3.3 0.0033 P6.5 retina TGCCTTGTCC (4) 1.7 0.0017 P10.5 crx+ retina GGGCTTTGGG (5) 1.9 0.0019 P10.5 crx+ retina TGCCTTGTCC (4) 1.9 0.0019 Adult retinal GGGCTTTGGG (5) 1.9 0.0019 ONL TAATATTTTT (2) 1.9 0.0019 ONL TGCCTTGTCC (4) 1.9 0.0019