Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.830
Psme1
proteasome (prosome, macropain) 28 subunit, alpha
14
14 22.5 cM
19186
Human Homolog
PSME1[proteasome (prosome, macropain) activator subunit 1 (PA28 alpha)]
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 45 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
GAGATCCGAA
(
2
)
3.3
0.0033
P8 Cb GC
AGAAGGAAGA (
6
)
1.6
0.0016
P8 Cb GC
GCAGGGGTTT (
3
)
1.6
0.0016
P8 Cb GC
TCACTGAGCA (
3
)
1.6
0.0016
Cb medulloblastoma
ACTCCTCCCA (
4
)
2.3
0.0023
Cb medulloblastoma
GCAGGGGTTT (
3
)
2.3
0.0023
Cb medulloblastoma
GGCACACTGA
(
4
)
2.3
0.0023
P8 GC+1d culture
GAGATCCGAA
(
2
)
8
0.008
P8 GC+1d culture
ACTCCTCCCA (
4
)
1.1
0.0011
P8 GC+SHH+1d culture
GAGATCCGAA
(
2
)
4.7
0.0047
3T3 fibroblasts
TCACTGAGCA (
3
)
10.5
0.0105
3T3 fibroblasts
ACTCCTCCCA (
4
)
3.5
0.0035
3T3 fibroblasts
GCAGGGGTTT (
3
)
3.5
0.0035
Hypothalamus
AGAAGGAAGA (
6
)
1.8
0.0018
Hypothalamus
GAGATCCGAA
(
2
)
1.8
0.0018
Hypothalamus
TCACTGAGCA (
3
)
1.8
0.0018
E12.5 retina
TCACTGAGCA (
3
)
5.6
0.0056
E12.5 retina
GAGATCCGAA
(
2
)
3.8
0.0038
E12.5 retina
GCAGGGGTTT (
3
)
3.8
0.0038
E12.5 retina
AGAAGGAAGA (
6
)
1.9
0.0019
E14.5 retina
GAGATCCGAA
(
2
)
9.1
0.0091
E16.5 retina
GAGATCCGAA
(
2
)
1.8
0.0018
E16.5 retina
TCACTGAGCA (
3
)
1.8
0.0018
E18.5 retina
AGAAGGAAGA (
6
)
1.8
0.0018
E18.5 retina
GAGATCCGAA
(
2
)
1.8
0.0018
E18.5 retina
GCAGGGGTTT (
3
)
1.8
0.0018
P0.5 retina
GAGATCCGAA
(
2
)
5.9
0.0059
P2.5 retina
AGAAGGAAGA (
6
)
3.5
0.0035
P2.5 retina
GAGATCCGAA
(
2
)
3.5
0.0035
P2.5 retina
TCACTGAGCA (
3
)
1.8
0.0018
P4.5 retina
GAGATCCGAA
(
2
)
5.9
0.0059
P4.5 retina
GCAGGGGTTT (
3
)
2
0.002
P4.5 retina
GGCACACTGA
(
4
)
2
0.002
P6.5 retina
GCAGGGGTTT (
3
)
3.3
0.0033
P6.5 retina
GGCACACTGA
(
4
)
1.7
0.0017
P10.5 crx- retina
GAGATCCGAA
(
2
)
14.9
0.0149
P10.5 crx- retina
GCAGGGGTTT (
3
)
11.1
0.0111
P10.5 crx+ retina
GCAGGGGTTT (
3
)
11.5
0.0115
P10.5 crx+ retina
GAGATCCGAA
(
2
)
1.9
0.0019
P10.5 crx+ retina
TCACTGAGCA (
3
)
1.9
0.0019
Adult retinal
GAGATCCGAA
(
2
)
3.7
0.0037
Adult retinal
GCAGGGGTTT (
3
)
3.7
0.0037
Adult retinal
GGCACACTGA
(
4
)
1.9
0.0019
Adult retinal
TCACTGAGCA (
3
)
1.9
0.0019
ONL
GCAGGGGTTT (
3
)
7.7
0.0077
