Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.8356
Mcoln1
mucolipin 1
8
8 1.1 cM
94178
Mm.8356
2210015I05Rik
RIKEN cDNA 2210015I05 gene
8
72356
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 62 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
CACACACACA (
106
)
11.4
0.0114
P8 Cb GC
AAAATCCCTG (
5
)
3.3
0.0033
P8 Cb GC
AGATCTGATG (
4
)
1.6
0.0016
P8 Cb GC
TAGGGCGGCT
(
2
)
1.6
0.0016
P8 Cb GC
TATCAGAGGA (
3
)
1.6
0.0016
Cb medulloblastoma
CACACACACA (
106
)
32.4
0.0324
Cb medulloblastoma
TAGGGCGGCT
(
2
)
20.8
0.0208
Cb medulloblastoma
AAAATCCCTG (
5
)
9.2
0.0092
P8 GC+1d culture
TAGGGCGGCT
(
2
)
11.4
0.0114
P8 GC+1d culture
CACACACACA (
106
)
6.8
0.0068
P8 GC+1d culture
AAAATCCCTG (
5
)
4.6
0.0046
P8 GC+1d culture
AGATCTGATG (
4
)
2.3
0.0023
P8 GC+SHH+1d culture
TAGGGCGGCT
(
2
)
18.7
0.0187
P8 GC+SHH+1d culture
CACACACACA (
106
)
9.4
0.0094
P8 GC+SHH+1d culture
AGATCTGATG (
4
)
3.5
0.0035
P8 GC+SHH+1d culture
AAAATCCCTG (
5
)
1.2
0.0012
3T3 fibroblasts
CACACACACA (
106
)
17.5
0.0175
3T3 fibroblasts
TAGGGCGGCT
(
2
)
7
0.007
E15 cortex
CACACACACA (
106
)
4.9
0.0049
P1 cortex
CACACACACA (
106
)
27.3
0.0273
P1 cortex
AAAATCCCTG (
5
)
4.5
0.0045
Hypothalamus
CACACACACA (
106
)
96
0.096
Hypothalamus
TAGGGCGGCT
(
2
)
19.9
0.0199
Hypothalamus
AGATCTGATG (
4
)
1.8
0.0018
E12.5 retina
TAGGGCGGCT
(
2
)
7.5
0.0075
E12.5 retina
CACACACACA (
106
)
3.8
0.0038
E14.5 retina
CACACACACA (
106
)
18.2
0.0182
E14.5 retina
TAGGGCGGCT
(
2
)
7.3
0.0073
E14.5 retina
AAAATCCCTG (
5
)
1.8
0.0018
E16.5 retina
CACACACACA (
106
)
12.7
0.0127
E16.5 retina
TAGGGCGGCT
(
2
)
12.7
0.0127
E16.5 retina
AAAATCCCTG (
5
)
1.8
0.0018
E18.5 retina
TAGGGCGGCT
(
2
)
16.4
0.0164
E18.5 retina
CACACACACA (
106
)
5.5
0.0055
E18.5 retina
AGATCTGATG (
4
)
1.8
0.0018
P0.5 retina
CACACACACA (
106
)
7.9
0.0079
P0.5 retina
AGATCTGATG (
4
)
3.9
0.0039
P0.5 retina
TAGGGCGGCT
(
2
)
2
0.002
P2.5 retina
CACACACACA (
106
)
21.1
0.0211
P2.5 retina
TAGGGCGGCT
(
2
)
17.6
0.0176
P4.5 retina
TAGGGCGGCT
(
2
)
19.8
0.0198
P4.5 retina
CACACACACA (
106
)
7.9
0.0079
P4.5 retina
AAAATCCCTG (
5
)
2
0.002
P6.5 retina
TAGGGCGGCT
(
2
)
16.7
0.0167
P6.5 retina
CACACACACA (
106
)
8.3
0.0083
P6.5 retina
AAAATCCCTG (
5
)
3.3
0.0033
P6.5 retina
AGATCTGATG (
4
)
3.3
0.0033
P10.5 crx- retina
AAAATCCCTG (
5
)
9.3
0.0093
P10.5 crx- retina
TAGGGCGGCT
(
2
)
9.3
0.0093
P10.5 crx- retina
CACACACACA (
106
)
5.6
0.0056
P10.5 crx- retina
AGATCTGATG (
4
)
1.9
0.0019
P10.5 crx+ retina
TAGGGCGGCT
(
2
)
11.5
0.0115
P10.5 crx+ retina
AAAATCCCTG (
5
)
9.6
0.0096
P10.5 crx+ retina
CACACACACA (
106
)
7.7
0.0077
P10.5 crx+ retina
AGATCTGATG (
4
)
3.8
0.0038
Adult retinal
TAGGGCGGCT
(
2
)
18.5
0.0185
Adult retinal
CACACACACA (
106
)
16.7
0.0167
Adult retinal
AAAATCCCTG (
5
)
5.6
0.0056
ONL
CACACACACA (
106
)
21.1
0.0211
ONL
TAGGGCGGCT
(
2
)
7.7
0.0077
ONL
AGATCTGATG (
4
)
5.7
0.0057
ONL
AAAATCCCTG (
5
)
3.8
0.0038
