Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.83840
2310075M01Rik
RIKEN cDNA 2310075M01 gene
14
70213
Mm.83840
4933425F03Rik
RIKEN cDNA 4933425F03 gene
14
71145
Human Homolog
MGC45780[hypothetical protein MGC45780]
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 37 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
GCCGGGATTC (
3
)
3.3
0.0033
P8 Cb GC
TGTTCTAGAA (
4
)
1.6
0.0016
Cb medulloblastoma
GCCGGGATTC (
3
)
2.3
0.0023
Cb medulloblastoma
GCCTGGATTT
(
2
)
2.3
0.0023
Cb medulloblastoma
TGTTCTAGAA (
4
)
2.3
0.0023
P8 GC+1d culture
TGTTCTAGAA (
4
)
4.6
0.0046
P8 GC+1d culture
GCCTGGATTT
(
2
)
1.1
0.0011
P8 GC+SHH+1d culture
TGTTCTAGAA (
4
)
5.9
0.0059
P8 GC+SHH+1d culture
CTGGAGCCCC (
4
)
2.3
0.0023
3T3 fibroblasts
CTGGAGCCCC (
4
)
17.5
0.0175
3T3 fibroblasts
GCCGGGATTC (
3
)
3.5
0.0035
E15 cortex
CTGGAGCCCC (
4
)
4.9
0.0049
P1 cortex
CTGGAGCCCC (
4
)
9.1
0.0091
P1 cortex
GCCGGGATTC (
3
)
9.1
0.0091
Hypothalamus
CTGGAGCCCC (
4
)
1.8
0.0018
E12.5 retina
GCCGGGATTC (
3
)
3.8
0.0038
E12.5 retina
TGTTCTAGAA (
4
)
1.9
0.0019
E14.5 retina
GGAAATGAGA (
6
)
14.6
0.0146
E14.5 retina
GCCGGGATTC (
3
)
3.6
0.0036
E14.5 retina
CAGTCCTGGG
(
4
)
1.8
0.0018
E14.5 retina
TGTTCTAGAA (
4
)
1.8
0.0018
E18.5 retina
TGTTCTAGAA (
4
)
3.6
0.0036
E18.5 retina
CTGGAGCCCC (
4
)
1.8
0.0018
E18.5 retina
GCCGGGATTC (
3
)
1.8
0.0018
P0.5 retina
CTGGAGCCCC (
4
)
5.9
0.0059
P0.5 retina
CAGTCCTGGG
(
4
)
2
0.002
P2.5 retina
GCCGGGATTC (
3
)
8.8
0.0088
P2.5 retina
TGTTCTAGAA (
4
)
1.8
0.0018
P4.5 retina
TGTTCTAGAA (
4
)
4
0.004
P4.5 retina
CTGGAGCCCC (
4
)
2
0.002
P6.5 retina
CTGGAGCCCC (
4
)
6.7
0.0067
P10.5 crx- retina
TGTTCTAGAA (
4
)
1.9
0.0019
P10.5 crx+ retina
CTGGAGCCCC (
4
)
3.8
0.0038
P10.5 crx+ retina
GCCGGGATTC (
3
)
3.8
0.0038
P10.5 crx+ retina
CAGTCCTGGG
(
4
)
1.9
0.0019
Adult retinal
TGTTCTAGAA (
4
)
1.9
0.0019
ONL
GGAAATGAGA (
6
)
1.9
0.0019
