Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.84664
AI197429
expressed sequence AI197429
4
100050
Mm.84664
Rnu17d
RNA, U17d small nucleolar
399101
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 41 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
GTTTTCATTT (
11
)
13.1
0.0131
P8 Cb GC
GTTCTCATTT
(
3
)
4.9
0.0049
P8 Cb GC
GAGCAGAAAG
(
7
)
3.3
0.0033
Cb medulloblastoma
GTTTTCATTT (
11
)
2.3
0.0023
P8 GC+1d culture
GTTTTCATTT (
11
)
4.6
0.0046
P8 GC+1d culture
GAGCAGAAAG
(
7
)
2.3
0.0023
P8 GC+SHH+1d culture
GTTTTCATTT (
11
)
12.9
0.0129
P8 GC+SHH+1d culture
GAGCAGAAAG
(
7
)
2.3
0.0023
P8 GC+SHH+1d culture
GTGAAGGTTC
(
4
)
2.3
0.0023
P8 GC+SHH+1d culture
GTTCTCATTT
(
3
)
1.2
0.0012
3T3 fibroblasts
GTTTTCATTT (
11
)
3.5
0.0035
Hypothalamus
GAGCAGAAAG
(
7
)
1.8
0.0018
E12.5 retina
GTGAAGGTTC
(
4
)
1.9
0.0019
E12.5 retina
GTTTTCATTT (
11
)
1.9
0.0019
E14.5 retina
GTTTTCATTT (
11
)
7.3
0.0073
E16.5 retina
GTTTTCATTT (
11
)
7.2
0.0072
E16.5 retina
GAGCAGAAAG
(
7
)
5.4
0.0054
E16.5 retina
GTGAAGGTTC
(
4
)
5.4
0.0054
E16.5 retina
GTTCTCATTT
(
3
)
1.8
0.0018
E18.5 retina
GAGCAGAAAG
(
7
)
5.5
0.0055
E18.5 retina
GTTTTCATTT (
11
)
3.6
0.0036
E18.5 retina
GTTCTCATTT
(
3
)
1.8
0.0018
P0.5 retina
GTTTTCATTT (
11
)
11.8
0.0118
P0.5 retina
GTGAAGGTTC
(
4
)
2
0.002
P2.5 retina
GTTTTCATTT (
11
)
15.8
0.0158
P4.5 retina
GTTTTCATTT (
11
)
9.9
0.0099
P4.5 retina
GAGCAGAAAG
(
7
)
5.9
0.0059
P4.5 retina
GTGAAGGTTC
(
4
)
2
0.002
P4.5 retina
GTTCTCATTT
(
3
)
2
0.002
P6.5 retina
GTTTTCATTT (
11
)
11.7
0.0117
P6.5 retina
GTTCTCATTT
(
3
)
3.3
0.0033
P6.5 retina
GAGCAGAAAG
(
7
)
1.7
0.0017
P6.5 retina
GTGAAGGTTC
(
4
)
1.7
0.0017
P10.5 crx- retina
GTTTTCATTT (
11
)
27.9
0.0279
P10.5 crx- retina
GAGCAGAAAG
(
7
)
3.7
0.0037
P10.5 crx+ retina
GTTTTCATTT (
11
)
5.8
0.0058
P10.5 crx+ retina
GAGCAGAAAG
(
7
)
1.9
0.0019
Adult retinal
GTTTTCATTT (
11
)
11.1
0.0111
Adult retinal
GTTCTCATTT
(
3
)
1.9
0.0019
ONL
GTTTTCATTT (
11
)
5.7
0.0057
ONL
GTGAAGGTTC
(
4
)
1.9
0.0019
