Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.85289
4932432N11Rik
RIKEN cDNA 4932432N11 gene
13
74386
Human Homolog
C9orf76[chromosome 9 open reading frame 76]
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 44 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
GCACAACTTG (
6
)
220.2
0.2202
P8 Cb GC
TAAAGGGGTG
(
5
)
3.3
0.0033
Cb medulloblastoma
GCACAACTTG (
6
)
578.1
0.5781
Cb medulloblastoma
CACAAATAAA (
4
)
2.3
0.0023
Cb medulloblastoma
TAAAGGGGTG
(
5
)
2.3
0.0023
P8 GC+1d culture
GCACAACTTG (
6
)
251.1
0.2511
P8 GC+1d culture
TAAAGGGGTG
(
5
)
3.4
0.0034
P8 GC+1d culture
CACAAATAAA (
4
)
1.1
0.0011
P8 GC+SHH+1d culture
GCACAACTTG (
6
)
265.8
0.2658
P8 GC+SHH+1d culture
GGGAGTGAGG (
4
)
1.2
0.0012
P8 GC+SHH+1d culture
TAAAGGGGTG
(
5
)
1.2
0.0012
3T3 fibroblasts
GCACAACTTG (
6
)
73.6
0.0736
E15 cortex
GCACAACTTG (
6
)
197.9
0.1979
P1 cortex
GCACAACTTG (
6
)
90.9
0.0909
P1 cortex
CACAAATAAA (
4
)
9.1
0.0091
P1 cortex
GCAGACAGCA
(
3
)
4.5
0.0045
Hypothalamus
GCACAACTTG (
6
)
231.8
0.2318
Hypothalamus
TAAAGGGGTG
(
5
)
1.8
0.0018
E12.5 retina
GCACAACTTG (
6
)
95.7
0.0957
E12.5 retina
TAAAGGGGTG
(
5
)
3.8
0.0038
E14.5 retina
GCACAACTTG (
6
)
133
0.133
E14.5 retina
GGGAGTGAGG (
4
)
1.8
0.0018
E16.5 retina
GCACAACTTG (
6
)
161.2
0.1612
E16.5 retina
TAAAGGGGTG
(
5
)
3.6
0.0036
E18.5 retina
GCACAACTTG (
6
)
243.7
0.2437
P0.5 retina
GCACAACTTG (
6
)
217.8
0.2178
P0.5 retina
TAAAGGGGTG
(
5
)
2
0.002
P2.5 retina
GCACAACTTG (
6
)
172.5
0.1725
P2.5 retina
TAAAGGGGTG
(
5
)
1.8
0.0018
P4.5 retina
GCACAACTTG (
6
)
194.2
0.1942
P4.5 retina
GCAGACAGCA
(
3
)
2
0.002
P6.5 retina
GCACAACTTG (
6
)
143.4
0.1434
P6.5 retina
TAAAGGGGTG
(
5
)
1.7
0.0017
P10.5 crx- retina
GCACAACTTG (
6
)
206.2
0.2062
P10.5 crx- retina
TAAAGGGGTG
(
5
)
1.9
0.0019
P10.5 crx+ retina
GCACAACTTG (
6
)
288.4
0.2884
P10.5 crx+ retina
CACAAATAAA (
4
)
1.9
0.0019
P10.5 crx+ retina
GCAGACAGCA
(
3
)
1.9
0.0019
P10.5 crx+ retina
TAAAGGGGTG
(
5
)
1.9
0.0019
Adult retinal
GCACAACTTG (
6
)
94.4
0.0944
Adult retinal
GCAGACAGCA
(
3
)
1.9
0.0019
Adult retinal
TAAAGGGGTG
(
5
)
1.9
0.0019
ONL
GCACAACTTG (
6
)
40.2
0.0402
ONL
GCAGACAGCA
(
3
)
1.9
0.0019
