Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.8575	Sox13	SRY-box containing gene 13	1		20668
Gene Ontology	DNA binding | nucleus | regulation of transcription, DNA-dependent | transcription factor activity | transcription factor complex
Human Homolog	SOX13[SRY (sex determining region Y)-box 13]

No In Situ Hybridization images could be found.



SAGE Tags

Total 28 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC CTGAGCTGTG (3) 1.6 0.0016 P8 Cb GC TGGAAGCTAG 1.6 0.0016 Cb medulloblastoma CTGAGCTGTG (3) 4.6 0.0046 P8 GC+1d culture CTGAGCTGTG (3) 4.6 0.0046 P8 GC+1d culture CTTTGGTTTC (8) 3.4 0.0034 P8 GC+SHH+1d culture CTGAGCTGTG (3) 5.9 0.0059 P8 GC+SHH+1d culture GCCAGGACCC (6) 2.3 0.0023 P8 GC+SHH+1d culture CTTTGGTTTC (8) 1.2 0.0012 P8 GC+SHH+1d culture TATGGCAGTG (6) 1.2 0.0012 P8 GC+SHH+1d culture TGGAAGCTAG 1.2 0.0012 3T3 fibroblasts CTGAGCTGTG (3) 3.5 0.0035 E15 cortex CTGAGCTGTG (3) 4.9 0.0049 P1 cortex CTTTGGTTTC (8) 4.5 0.0045 Hypothalamus TATGGCAGTG (6) 1.8 0.0018 Hypothalamus TGGAAGCTAG 1.8 0.0018 E12.5 retina CTGAGCTGTG (3) 1.9 0.0019 E14.5 retina GCCAGGACCC (6) 1.8 0.0018 E16.5 retina CTGAGCTGTG (3) 1.8 0.0018 E16.5 retina GCCAGGACCC (6) 1.8 0.0018 P0.5 retina CTTTGGTTTC (8) 3.9 0.0039 P2.5 retina CTGAGCTGTG (3) 3.5 0.0035 P2.5 retina CTTTGGTTTC (8) 1.8 0.0018 P4.5 retina GCCAGGACCC (6) 2 0.002 P6.5 retina GCCAGGACCC (6) 1.7 0.0017 P10.5 crx- retina CTGAGCTGTG (3) 1.9 0.0019 P10.5 crx+ retina CTGAGCTGTG (3) 3.8 0.0038 Adult retinal CTGAGCTGTG (3) 7.4 0.0074 ONL CTTTGGTTTC (8) 1.9 0.0019