Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.86338
BC022645
cDNA sequence BC022645
9
9 64.01 cM
235633
Human Homolog
ALS2CL[ALS2 C-terminal like]
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 31 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
TCAAAAAAAA (
60
)
17.9
0.0179
P8 Cb GC
ACTTCCTGTG (
5
)
1.6
0.0016
Cb medulloblastoma
TCAAAAAAAA (
60
)
99.4
0.0994
P8 GC+1d culture
TCAAAAAAAA (
60
)
17.1
0.0171
P8 GC+1d culture
ACTTCCTGTG (
5
)
1.1
0.0011
P8 GC+1d culture
ATTTTTAATA
(
2
)
1.1
0.0011
P8 GC+1d culture
GTTGTTACCA
(
3
)
1.1
0.0011
P8 GC+SHH+1d culture
TCAAAAAAAA (
60
)
51.5
0.0515
P8 GC+SHH+1d culture
AGAGAGAGGA
(
3
)
2.3
0.0023
3T3 fibroblasts
TCAAAAAAAA (
60
)
7
0.007
3T3 fibroblasts
AGAGAGAGGA
(
3
)
3.5
0.0035
E15 cortex
TCAAAAAAAA (
60
)
14.8
0.0148
E15 cortex
ACTTCCTGTG (
5
)
4.9
0.0049
P1 cortex
TCAAAAAAAA (
60
)
22.7
0.0227
P1 cortex
ATTTTTAATA
(
2
)
4.5
0.0045
Hypothalamus
TCAAAAAAAA (
60
)
39.8
0.0398
E12.5 retina
TCAAAAAAAA (
60
)
18.8
0.0188
E14.5 retina
TCAAAAAAAA (
60
)
41.9
0.0419
E16.5 retina
TCAAAAAAAA (
60
)
18.1
0.0181
E18.5 retina
TCAAAAAAAA (
60
)
49.1
0.0491
E18.5 retina
ATTTTTAATA
(
2
)
1.8
0.0018
P0.5 retina
TCAAAAAAAA (
60
)
31.4
0.0314
P2.5 retina
TCAAAAAAAA (
60
)
35.2
0.0352
P4.5 retina
TCAAAAAAAA (
60
)
37.6
0.0376
P6.5 retina
TCAAAAAAAA (
60
)
31.7
0.0317
P10.5 crx- retina
TCAAAAAAAA (
60
)
14.9
0.0149
P10.5 crx+ retina
TCAAAAAAAA (
60
)
17.3
0.0173
Adult retinal
TCAAAAAAAA (
60
)
20.4
0.0204
ONL
TCAAAAAAAA (
60
)
15.3
0.0153
ONL
ACTTCCTGTG (
5
)
1.9
0.0019
ONL
GTTGTTACCA
(
3
)
1.9
0.0019
