Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.86343	Taf3	TAF3 RNA polymerase II, TATA box binding protein (TBP)-associated factor	2		209361
Gene Ontology	protein binding | RNA polymerase II transcription factor activity | transcription factor TFIID complex | transcription from Pol II promoter
Human Homolog	TAF3[TAF3 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 140kDa]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 56 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GTGGTTGAAA (8) 9.8 0.0098 P8 Cb GC CAGGTGCCCT 3.3 0.0033 P8 Cb GC CGTGAAGGCT 1.6 0.0016 P8 Cb GC TGAAAATATT (4) 1.6 0.0016 Cb medulloblastoma GTGGTTGAAA (8) 4.6 0.0046 P8 GC+1d culture GTGGTTGAAA (8) 6.8 0.0068 P8 GC+1d culture TGAAAATATT (4) 3.4 0.0034 P8 GC+1d culture TTGCTGAAAG (4) 2.3 0.0023 P8 GC+1d culture CAGGTGCCCT 1.1 0.0011 P8 GC+1d culture TAGTTTCCAC 1.1 0.0011 P8 GC+1d culture TCCTGTCCAC (2) 1.1 0.0011 P8 GC+SHH+1d culture GTGGTTGAAA (8) 9.4 0.0094 P8 GC+SHH+1d culture TTGCTGAAAG (4) 2.3 0.0023 P8 GC+SHH+1d culture CAGGTGCCCT 1.2 0.0012 E15 cortex GTGGTTGAAA (8) 34.6 0.0346 E15 cortex CTGCCGGCCT 14.8 0.0148 P1 cortex GTGGTTGAAA (8) 9.1 0.0091 P1 cortex TAGTTTCCAC 4.5 0.0045 Hypothalamus GTGGTTGAAA (8) 14.5 0.0145 Hypothalamus CTGCCGGCCT 1.8 0.0018 E12.5 retina GTGGTTGAAA (8) 28.2 0.0282 E12.5 retina TTGCTGAAAG (4) 7.5 0.0075 E14.5 retina GTGGTTGAAA (8) 23.7 0.0237 E14.5 retina TGAAAATATT (4) 3.6 0.0036 E14.5 retina TTGCTGAAAG (4) 1.8 0.0018 E16.5 retina GTGGTTGAAA (8) 23.5 0.0235 E16.5 retina CGTGAAGGCT 1.8 0.0018 E16.5 retina CTGCCGGCCT 1.8 0.0018 E16.5 retina TGAAAATATT (4) 1.8 0.0018 E18.5 retina GTGGTTGAAA (8) 61.8 0.0618 E18.5 retina TGAAAATATT (4) 5.5 0.0055 E18.5 retina TCCTGTCCAC (2) 3.6 0.0036 E18.5 retina TAGTTTCCAC 1.8 0.0018 P0.5 retina GTGGTTGAAA (8) 17.7 0.0177 P0.5 retina TAGTTTCCAC 2 0.002 P2.5 retina GTGGTTGAAA (8) 19.4 0.0194 P2.5 retina CTGCCGGCCT 5.3 0.0053 P2.5 retina TGAAAATATT (4) 3.5 0.0035 P2.5 retina CAGGTGCCCT 1.8 0.0018 P2.5 retina TTGTTCATTG (4) 1.8 0.0018 P4.5 retina GTGGTTGAAA (8) 17.8 0.0178 P4.5 retina CTGCCGGCCT 4 0.004 P4.5 retina TGAAAATATT (4) 4 0.004 P6.5 retina GTGGTTGAAA (8) 11.7 0.0117 P6.5 retina TAGTTTCCAC 3.3 0.0033 P6.5 retina TGAAAATATT (4) 3.3 0.0033 P6.5 retina CTGCCGGCCT 1.7 0.0017 P10.5 crx- retina TGAAAATATT (4) 5.6 0.0056 P10.5 crx- retina TTGTTCATTG (4) 3.7 0.0037 P10.5 crx- retina GTGGTTGAAA (8) 1.9 0.0019 P10.5 crx+ retina GTGGTTGAAA (8) 3.8 0.0038 P10.5 crx+ retina TGAAAATATT (4) 3.8 0.0038 P10.5 crx+ retina TCCTGTCCAC (2) 1.9 0.0019 Adult retinal GTGGTTGAAA (8) 3.7 0.0037 Adult retinal CAGGTGCCCT 1.9 0.0019 Adult retinal CTGCCGGCCT 1.9 0.0019