Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.86360
C530044N13Rik
RIKEN cDNA C530044N13 gene
16
223978
Gene Ontology
hydrolase activity
Human Homolog
FLJ11151[hypothetical protein FLJ11151]
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 52 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
AAAAAAAAAA (
658
)
203.9
0.2039
P8 Cb GC
CCAAAAAAAA (
35
)
22.8
0.0228
P8 Cb GC
TGCTAAGGAT
1.6
0.0016
Cb medulloblastoma
AAAAAAAAAA (
658
)
797.8
0.7978
Cb medulloblastoma
CCAAAAAAAA (
35
)
90.2
0.0902
P8 GC+1d culture
AAAAAAAAAA (
658
)
204.3
0.2043
P8 GC+1d culture
CCAAAAAAAA (
35
)
38.8
0.0388
P8 GC+1d culture
TGCTAAGGAT
1.1
0.0011
P8 GC+SHH+1d culture
AAAAAAAAAA (
658
)
278.7
0.2787
P8 GC+SHH+1d culture
CCAAAAAAAA (
35
)
39.8
0.0398
P8 GC+SHH+1d culture
TGCTAAGGAT
1.2
0.0012
3T3 fibroblasts
AAAAAAAAAA (
658
)
28
0.028
E15 cortex
AAAAAAAAAA (
658
)
212.8
0.2128
E15 cortex
CCAAAAAAAA (
35
)
9.9
0.0099
P1 cortex
AAAAAAAAAA (
658
)
245.4
0.2454
P1 cortex
CCAAAAAAAA (
35
)
40.9
0.0409
Hypothalamus
AAAAAAAAAA (
658
)
123.2
0.1232
Hypothalamus
CCAAAAAAAA (
35
)
38
0.038
Hypothalamus
TGCTAAGGAT
1.8
0.0018
E12.5 retina
AAAAAAAAAA (
658
)
138.9
0.1389
E12.5 retina
CCAAAAAAAA (
35
)
16.9
0.0169
E14.5 retina
AAAAAAAAAA (
658
)
94.7
0.0947
E14.5 retina
CCAAAAAAAA (
35
)
18.2
0.0182
E16.5 retina
AAAAAAAAAA (
658
)
43.5
0.0435
E16.5 retina
CCAAAAAAAA (
35
)
16.3
0.0163
E18.5 retina
AAAAAAAAAA (
658
)
374.7
0.3747
E18.5 retina
CCAAAAAAAA (
35
)
38.2
0.0382
E18.5 retina
TGCTAAGGAT
1.8
0.0018
P0.5 retina
AAAAAAAAAA (
658
)
117.8
0.1178
P0.5 retina
CCAAAAAAAA (
35
)
29.4
0.0294
P0.5 retina
TGCTAAGGAT
2
0.002
P2.5 retina
AAAAAAAAAA (
658
)
329.1
0.3291
P2.5 retina
CCAAAAAAAA (
35
)
44
0.044
P4.5 retina
AAAAAAAAAA (
658
)
283.3
0.2833
P4.5 retina
CCAAAAAAAA (
35
)
39.6
0.0396
P4.5 retina
CTTCCTGCCT
(
5
)
2
0.002
P4.5 retina
TGCTAAGGAT
2
0.002
P6.5 retina
AAAAAAAAAA (
658
)
266.8
0.2668
P6.5 retina
CCAAAAAAAA (
35
)
38.3
0.0383
P10.5 crx- retina
AAAAAAAAAA (
658
)
44.6
0.0446
P10.5 crx- retina
CCAAAAAAAA (
35
)
14.9
0.0149
P10.5 crx- retina
TGCTAAGGAT
1.9
0.0019
P10.5 crx+ retina
AAAAAAAAAA (
658
)
96.1
0.0961
P10.5 crx+ retina
CCAAAAAAAA (
35
)
38.4
0.0384
P10.5 crx+ retina
TGCTAAGGAT
1.9
0.0019
Adult retinal
AAAAAAAAAA (
658
)
57.4
0.0574
Adult retinal
CCAAAAAAAA (
35
)
35.2
0.0352
Adult retinal
CTTCCTGCCT
(
5
)
3.7
0.0037
ONL
AAAAAAAAAA (
658
)
103.4
0.1034
ONL
CCAAAAAAAA (
35
)
7.7
0.0077
ONL
CTTCCTGCCT
(
5
)
1.9
0.0019
ONL
TGCTAAGGAT
1.9
0.0019
