Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.86560
2810002N01Rik
RIKEN cDNA 2810002N01 gene
12
68020
Human Homolog
C14orf153[chromosome 14 open reading frame 153]
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 58 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
TGGTTGCTGG (
369
)
68.5
0.0685
Cb medulloblastoma
TGGTTGCTGG (
369
)
113.3
0.1133
Cb medulloblastoma
GGGAAGGTGG
(
6
)
2.3
0.0023
P8 GC+1d culture
TGGTTGCTGG (
369
)
57.1
0.0571
P8 GC+1d culture
GGGAAGGTGG
(
6
)
1.1
0.0011
P8 GC+SHH+1d culture
TGGTTGCTGG (
369
)
89
0.089
P8 GC+SHH+1d culture
GGGAAGGTGG
(
6
)
1.2
0.0012
P8 GC+SHH+1d culture
TGGTTGGTGG (
11
)
1.2
0.0012
3T3 fibroblasts
TGGTTGCTGG (
369
)
220.8
0.2208
3T3 fibroblasts
GGGAAGGTGG
(
6
)
3.5
0.0035
3T3 fibroblasts
GTGGGCTCAC (
14
)
3.5
0.0035
3T3 fibroblasts
TGGTTGGTGG (
11
)
3.5
0.0035
E15 cortex
TGGTTGCTGG (
369
)
277.1
0.2771
E15 cortex
GTGGGCTCAC (
14
)
9.9
0.0099
E15 cortex
TGGTTGGTGG (
11
)
4.9
0.0049
P1 cortex
TGGTTGCTGG (
369
)
86.4
0.0864
P1 cortex
TGGTTGGTGG (
11
)
4.5
0.0045
Hypothalamus
TGGTTGCTGG (
369
)
349.6
0.3496
Hypothalamus
GTGGGCTCAC (
14
)
3.6
0.0036
Hypothalamus
GGGAAGGTGG
(
6
)
1.8
0.0018
E12.5 retina
TGGTTGCTGG (
369
)
157.7
0.1577
E12.5 retina
GTGGGCTCAC (
14
)
1.9
0.0019
E14.5 retina
TGGTTGCTGG (
369
)
936.5
0.9365
E14.5 retina
TGGTTGGTGG (
11
)
3.6
0.0036
E16.5 retina
TGGTTGCTGG (
369
)
767.9
0.7679
E16.5 retina
GTGGGCTCAC (
14
)
5.4
0.0054
E16.5 retina
GGGAAGGTGG
(
6
)
1.8
0.0018
E16.5 retina
TGGTTGGTGG (
11
)
1.8
0.0018
E18.5 retina
TGGTTGCTGG (
369
)
252.8
0.2528
P0.5 retina
TGGTTGCTGG (
369
)
190.4
0.1904
P0.5 retina
GGGAAGGTGG
(
6
)
3.9
0.0039
P0.5 retina
GTGGGCTCAC (
14
)
3.9
0.0039
P0.5 retina
TGGTTGGTGG (
11
)
2
0.002
P2.5 retina
TGGTTGCTGG (
369
)
165.4
0.1654
P2.5 retina
GTGGGCTCAC (
14
)
5.3
0.0053
P2.5 retina
GGGAAGGTGG
(
6
)
3.5
0.0035
P2.5 retina
ATGAACAGTG (
6
)
1.8
0.0018
P4.5 retina
TGGTTGCTGG (
369
)
150.6
0.1506
P4.5 retina
GTGGGCTCAC (
14
)
7.9
0.0079
P4.5 retina
TGGTTGGTGG (
11
)
5.9
0.0059
P6.5 retina
TGGTTGCTGG (
369
)
156.7
0.1567
P6.5 retina
TGGTTGGTGG (
11
)
5
0.005
P6.5 retina
GTGGGCTCAC (
14
)
3.3
0.0033
P6.5 retina
GGGAAGGTGG
(
6
)
1.7
0.0017
P10.5 crx- retina
TGGTTGCTGG (
369
)
280.5
0.2805
P10.5 crx- retina
GTGGGCTCAC (
14
)
5.6
0.0056
P10.5 crx- retina
ATGAACAGTG (
6
)
1.9
0.0019
P10.5 crx- retina
GGGAAGGTGG
(
6
)
1.9
0.0019
P10.5 crx+ retina
TGGTTGCTGG (
369
)
101.9
0.1019
P10.5 crx+ retina
GTGGGCTCAC (
14
)
5.8
0.0058
Adult retinal
TGGTTGCTGG (
369
)
214.8
0.2148
Adult retinal
GTGGGCTCAC (
14
)
7.4
0.0074
Adult retinal
TGGTTGGTGG (
11
)
1.9
0.0019
ONL
TGGTTGCTGG (
369
)
398.4
0.3984
ONL
GTGGGCTCAC (
14
)
5.7
0.0057
ONL
TGGTTGGTGG (
11
)
3.8
0.0038
ONL
ATGAACAGTG (
6
)
1.9
0.0019
ONL
GGGAAGGTGG
(
6
)
1.9
0.0019
