Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.86670	Tbpl1	TATA box binding protein-like 1	10		237336
Gene Ontology	acrosome formation | cytoplasm | DNA binding | dTTP biosynthesis | nucleus | regulation of transcription, DNA-dependent | RNA polymerase II transcription factor activity | spermatogenesis | spermatogenesis | transcription factor TFIID complex | transcription initiation from Pol II promoter
Human Homolog	TBPL1[TBP-like 1]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 50 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GCCGAGTCTG (2) 4.9 0.0049 P8 Cb GC TTTCTGAACA 3.3 0.0033 P8 Cb GC TGCACCATAT 1.6 0.0016 Cb medulloblastoma GAGACCTGGG (4) 2.3 0.0023 Cb medulloblastoma TCCCACAGGC (8) 2.3 0.0023 P8 GC+1d culture GCCGAGTCTG (2) 4.6 0.0046 P8 GC+1d culture GTGGGAACAA (6) 2.3 0.0023 P8 GC+1d culture AAGCCTGTGG (5) 1.1 0.0011 P8 GC+1d culture GAGACCTGGG (4) 1.1 0.0011 P8 GC+1d culture TCCCACAGGC (8) 1.1 0.0011 P8 GC+1d culture TGCACCATAT 1.1 0.0011 P8 GC+SHH+1d culture GCCGAGTCTG (2) 8.2 0.0082 P8 GC+SHH+1d culture AAGCCTGTGG (5) 2.3 0.0023 P8 GC+SHH+1d culture TATATAAGCT (5) 1.2 0.0012 P8 GC+SHH+1d culture TCCCACAGGC (8) 1.2 0.0012 3T3 fibroblasts GCCGAGTCTG (2) 3.5 0.0035 3T3 fibroblasts GTGGGAACAA (6) 3.5 0.0035 E15 cortex CCCTTGAGAT (3) 4.9 0.0049 E15 cortex GCCGAGTCTG (2) 4.9 0.0049 P1 cortex GTGGGAACAA (6) 9.1 0.0091 Hypothalamus GCCGAGTCTG (2) 1.8 0.0018 Hypothalamus TATATAAGCT (5) 1.8 0.0018 E12.5 retina GCCGAGTCTG (2) 3.8 0.0038 E12.5 retina TTTCTGAACA 3.8 0.0038 E12.5 retina GTGGGAACAA (6) 1.9 0.0019 E14.5 retina TCCCACAGGC (8) 1.8 0.0018 E16.5 retina GTGGGAACAA (6) 3.6 0.0036 E16.5 retina TCCCACAGGC (8) 3.6 0.0036 E16.5 retina GCCGAGTCTG (2) 1.8 0.0018 E18.5 retina AAGCCTGTGG (5) 1.8 0.0018 E18.5 retina GCCGAGTCTG (2) 1.8 0.0018 P0.5 retina GTGGGAACAA (6) 5.9 0.0059 P0.5 retina GCCGAGTCTG (2) 3.9 0.0039 P0.5 retina TCCCACAGGC (8) 3.9 0.0039 P2.5 retina GCCGAGTCTG (2) 1.8 0.0018 P2.5 retina TTTCTGAACA 1.8 0.0018 P4.5 retina GCCGAGTCTG (2) 4 0.004 P4.5 retina TATATAAGCT (5) 2 0.002 P6.5 retina GCCGAGTCTG (2) 10 0.01 P6.5 retina TATATAAGCT (5) 3.3 0.0033 P6.5 retina CCCTTGAGAT (3) 1.7 0.0017 P10.5 crx- retina GTGGGAACAA (6) 5.6 0.0056 P10.5 crx- retina GAGACCTGGG (4) 1.9 0.0019 P10.5 crx+ retina GCCGAGTCTG (2) 5.8 0.0058 P10.5 crx+ retina CCCTTGAGAT (3) 1.9 0.0019 P10.5 crx+ retina GAGACCTGGG (4) 1.9 0.0019 P10.5 crx+ retina GTGGGAACAA (6) 1.9 0.0019 P10.5 crx+ retina TGCACCATAT 1.9 0.0019 Adult retinal GCCGAGTCTG (2) 1.9 0.0019 Adult retinal TGCACCATAT 1.9 0.0019