Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.87216	Rabggta	Rab geranylgeranyl transferase, a subunit	14	14 20.7 cM	56187
Gene Ontology	prenyltransferase activity | protein amino acid prenylation | protein prenylation | protein prenyltransferase activity | transferase activity
Human Homolog	RABGGTA[Rab geranylgeranyltransferase, alpha subunit]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 51 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TGGTTGCTGG (369) 68.5 0.0685 P8 Cb GC GTGGCTCATA (21) 22.8 0.0228 Cb medulloblastoma TGGTTGCTGG (369) 113.3 0.1133 Cb medulloblastoma GTGGCTCATA (21) 23.1 0.0231 Cb medulloblastoma TGGTCGCTGG (2) 2.3 0.0023 P8 GC+1d culture TGGTTGCTGG (369) 57.1 0.0571 P8 GC+1d culture GTGGCTCATA (21) 26.3 0.0263 P8 GC+SHH+1d culture TGGTTGCTGG (369) 89 0.089 P8 GC+SHH+1d culture GTGGCTCATA (21) 24.6 0.0246 P8 GC+SHH+1d culture TCTGGCTCTG (6) 1.2 0.0012 3T3 fibroblasts TGGTTGCTGG (369) 220.8 0.2208 3T3 fibroblasts GTGGCTCATA (21) 24.5 0.0245 3T3 fibroblasts TCTGGCTCTG (6) 3.5 0.0035 E15 cortex TGGTTGCTGG (369) 277.1 0.2771 E15 cortex GTGGCTCATA (21) 39.6 0.0396 P1 cortex TGGTTGCTGG (369) 86.4 0.0864 P1 cortex GTGGCTCATA (21) 27.3 0.0273 Hypothalamus TGGTTGCTGG (369) 349.6 0.3496 Hypothalamus GTGGCTCATA (21) 30.8 0.0308 E12.5 retina TGGTTGCTGG (369) 157.7 0.1577 E12.5 retina GTGGCTCATA (21) 82.6 0.0826 E14.5 retina TGGTTGCTGG (369) 936.5 0.9365 E14.5 retina GTGGCTCATA (21) 49.2 0.0492 E14.5 retina TGGTCGCTGG (2) 9.1 0.0091 E16.5 retina TGGTTGCTGG (369) 767.9 0.7679 E16.5 retina GTGGCTCATA (21) 34.4 0.0344 E16.5 retina TGGTCGCTGG (2) 14.5 0.0145 E18.5 retina TGGTTGCTGG (369) 252.8 0.2528 E18.5 retina GTGGCTCATA (21) 47.3 0.0473 P0.5 retina TGGTTGCTGG (369) 190.4 0.1904 P0.5 retina GTGGCTCATA (21) 41.2 0.0412 P0.5 retina TCTGGCTCTG (6) 2 0.002 P0.5 retina TGGTCGCTGG (2) 2 0.002 P2.5 retina TGGTTGCTGG (369) 165.4 0.1654 P2.5 retina GTGGCTCATA (21) 49.3 0.0493 P4.5 retina TGGTTGCTGG (369) 150.6 0.1506 P4.5 retina GTGGCTCATA (21) 53.5 0.0535 P4.5 retina TGGTCGCTGG (2) 2 0.002 P6.5 retina TGGTTGCTGG (369) 156.7 0.1567 P6.5 retina GTGGCTCATA (21) 33.3 0.0333 P6.5 retina TGGTCGCTGG (2) 3.3 0.0033 P10.5 crx- retina TGGTTGCTGG (369) 280.5 0.2805 P10.5 crx- retina GTGGCTCATA (21) 33.4 0.0334 P10.5 crx+ retina TGGTTGCTGG (369) 101.9 0.1019 P10.5 crx+ retina GTGGCTCATA (21) 38.4 0.0384 P10.5 crx+ retina TGGTCGCTGG (2) 1.9 0.0019 Adult retinal TGGTTGCTGG (369) 214.8 0.2148 Adult retinal GTGGCTCATA (21) 24.1 0.0241 ONL TGGTTGCTGG (369) 398.4 0.3984 ONL GTGGCTCATA (21) 49.8 0.0498 ONL TGGTCGCTGG (2) 1.9 0.0019