Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.873	Snrp116	U5 small nuclear ribonucleoprotein	11		20624
Gene Ontology	GTP binding | nuclear mRNA splicing, via spliceosome | nucleus | protein binding | protein biosynthesis | ribonucleoprotein complex | spliceosome complex | translation elongation factor activity | translational elongation | viral nucleocapsid
Human Homolog	U5-116KD[U5 snRNP-specific protein, 116 kD]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 48 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GAATTTTATT (11) 11.4 0.0114 P8 Cb GC AGGACAAAAA (3) 1.6 0.0016 P8 Cb GC AGGAGAGAAG (3) 1.6 0.0016 Cb medulloblastoma GAATTTTATT (11) 6.9 0.0069 Cb medulloblastoma AGGAGAGAAG (3) 2.3 0.0023 P8 GC+1d culture AGGACAAAAA (3) 2.3 0.0023 P8 GC+1d culture TACAATGAAC (3) 2.3 0.0023 P8 GC+1d culture ATGACCAGTA (8) 1.1 0.0011 P8 GC+1d culture GAATTTTATT (11) 1.1 0.0011 P8 GC+1d culture GCCACTCCCC (8) 1.1 0.0011 P8 GC+SHH+1d culture GAATTTTATT (11) 4.7 0.0047 P8 GC+SHH+1d culture AGGACAAAAA (3) 3.5 0.0035 P8 GC+SHH+1d culture ATGACCAGTA (8) 1.2 0.0012 P8 GC+SHH+1d culture GTGGAATTTT (4) 1.2 0.0012 P8 GC+SHH+1d culture TACAATGAAC (3) 1.2 0.0012 E15 cortex GAATTTTATT (11) 14.8 0.0148 P1 cortex TACAATGAAC (3) 4.5 0.0045 Hypothalamus GAATTTTATT (11) 3.6 0.0036 Hypothalamus GCCACTCCCC (8) 1.8 0.0018 Hypothalamus TAAGTCCTGA (2) 1.8 0.0018 E12.5 retina AGGACAAAAA (3) 1.9 0.0019 E12.5 retina ATGACCAGTA (8) 1.9 0.0019 E12.5 retina GAATTTTATT (11) 1.9 0.0019 E12.5 retina TACAATGAAC (3) 1.9 0.0019 E14.5 retina GAATTTTATT (11) 12.8 0.0128 E14.5 retina AGGAGAGAAG (3) 1.8 0.0018 E14.5 retina TAAGTCCTGA (2) 1.8 0.0018 E16.5 retina GAATTTTATT (11) 7.2 0.0072 E16.5 retina AGGACAAAAA (3) 1.8 0.0018 E18.5 retina GAATTTTATT (11) 9.1 0.0091 E18.5 retina GTGGAATTTT (4) 3.6 0.0036 E18.5 retina AGGAGAGAAG (3) 1.8 0.0018 E18.5 retina TAAGTCCTGA (2) 1.8 0.0018 P0.5 retina GAATTTTATT (11) 3.9 0.0039 P2.5 retina GAATTTTATT (11) 3.5 0.0035 P2.5 retina AGGACAAAAA (3) 1.8 0.0018 P2.5 retina ATGACCAGTA (8) 1.8 0.0018 P2.5 retina GCCACTCCCC (8) 1.8 0.0018 P4.5 retina GAATTTTATT (11) 4 0.004 P4.5 retina GCCACTCCCC (8) 2 0.002 P6.5 retina GAATTTTATT (11) 3.3 0.0033 P10.5 crx- retina GAATTTTATT (11) 3.7 0.0037 P10.5 crx- retina TAAGTCCTGA (2) 1.9 0.0019 P10.5 crx- retina TACAATGAAC (3) 1.9 0.0019 P10.5 crx+ retina GAATTTTATT (11) 3.8 0.0038 Adult retinal AGGACAAAAA (3) 1.9 0.0019 Adult retinal TAAGTCCTGA (2) 1.9 0.0019 ONL GAATTTTATT (11) 1.9 0.0019