Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.8739	Sgce	sarcoglycan, epsilon	6	6 1.0 cM	20392
Gene Ontology	calcium ion binding | cytoskeleton | extracellular space | integral to membrane | integral to plasma membrane | protein binding | sarcoglycan complex
Human Homolog	SGCE[sarcoglycan, epsilon]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 57 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC CCCACTGTGT 6.5 0.0065 P8 Cb GC CCTGTCTACT (5) 1.6 0.0016 P8 Cb GC TGCTGCCCGC (2) 1.6 0.0016 Cb medulloblastoma TGCTGCCCGC (2) 6.9 0.0069 Cb medulloblastoma CCCACTGTGT 2.3 0.0023 Cb medulloblastoma CCTGTCTACT (5) 2.3 0.0023 P8 GC+1d culture CCTGTCTACT (5) 9.1 0.0091 P8 GC+1d culture TGCTGCCCGC (2) 3.4 0.0034 P8 GC+1d culture CCCACTGTGT 2.3 0.0023 P8 GC+1d culture TTGGTGCTGT (3) 1.1 0.0011 P8 GC+SHH+1d culture CCTGTCTACT (5) 11.7 0.0117 P8 GC+SHH+1d culture TGCTGCCCGC (2) 4.7 0.0047 P8 GC+SHH+1d culture CCCACTGTGT 2.3 0.0023 P8 GC+SHH+1d culture TTGGTGCTGT (3) 1.2 0.0012 3T3 fibroblasts CCTGTCTACT (5) 21 0.021 3T3 fibroblasts TTGGTGCTGT (3) 3.5 0.0035 E15 cortex CCTGTCTACT (5) 14.8 0.0148 E15 cortex TGTTGGAGAG (2) 4.9 0.0049 P1 cortex CCTGTCTACT (5) 9.1 0.0091 P1 cortex TGTTGGAGAG (2) 9.1 0.0091 Hypothalamus CCTGTCTACT (5) 1.8 0.0018 E12.5 retina CCTGTCTACT (5) 7.5 0.0075 E12.5 retina CCCACTGTGT 1.9 0.0019 E12.5 retina GGCTCAGGAA (7) 1.9 0.0019 E12.5 retina TGCTGCCCGC (2) 1.9 0.0019 E12.5 retina TTGGTGCTGT (3) 1.9 0.0019 E14.5 retina CCTGTCTACT (5) 5.5 0.0055 E14.5 retina CCCACTGTGT 1.8 0.0018 E16.5 retina CCTGTCTACT (5) 5.4 0.0054 E16.5 retina CCCACTGTGT 1.8 0.0018 E16.5 retina GGCTCAGGAA (7) 1.8 0.0018 E16.5 retina TGCTGCCCGC (2) 1.8 0.0018 E18.5 retina CCTGTCTACT (5) 1.8 0.0018 E18.5 retina GGCTCAGGAA (7) 1.8 0.0018 E18.5 retina TGCTGCCCGC (2) 1.8 0.0018 P0.5 retina CCTGTCTACT (5) 13.7 0.0137 P0.5 retina CCCACTGTGT 5.9 0.0059 P0.5 retina TGCTGCCCGC (2) 5.9 0.0059 P2.5 retina TGCTGCCCGC (2) 7 0.007 P2.5 retina GGCTCAGGAA (7) 3.5 0.0035 P4.5 retina TGCTGCCCGC (2) 5.9 0.0059 P4.5 retina CCTGTCTACT (5) 4 0.004 P4.5 retina GGCTCAGGAA (7) 4 0.004 P4.5 retina CCCACTGTGT 2 0.002 P6.5 retina TGCTGCCCGC (2) 5 0.005 P6.5 retina GGCTCAGGAA (7) 3.3 0.0033 P6.5 retina CCCACTGTGT 1.7 0.0017 P6.5 retina TTGGTGCTGT (3) 1.7 0.0017 P10.5 crx- retina CCTGTCTACT (5) 20.4 0.0204 P10.5 crx- retina TGCTGCCCGC (2) 3.7 0.0037 P10.5 crx- retina TTGGTGCTGT (3) 1.9 0.0019 P10.5 crx+ retina CCTGTCTACT (5) 5.8 0.0058 P10.5 crx+ retina TGCTGCCCGC (2) 1.9 0.0019 Adult retinal CCTGTCTACT (5) 14.8 0.0148 Adult retinal CCCACTGTGT 1.9 0.0019 ONL CCTGTCTACT (5) 3.8 0.0038 ONL TGCTGCCCGC (2) 1.9 0.0019