Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.87452
9430025M21Rik
RIKEN cDNA 9430025M21 gene
1
77300
Mm.87452
C730045O03Rik
RIKEN cDNA C730045O03 gene
1
320310
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 55 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
CTTTAAAAAA
(
15
)
3.3
0.0033
P8 Cb GC
AGAAAGATGG
(
3
)
1.6
0.0016
P8 Cb GC
TGTGGCATAC
(
2
)
1.6
0.0016
Cb medulloblastoma
CTTTAAAAAA
(
15
)
9.2
0.0092
Cb medulloblastoma
AAGAAAACAA
(
9
)
4.6
0.0046
P8 GC+1d culture
TGTGGCATAC
(
2
)
8
0.008
P8 GC+1d culture
CTTTAAAAAA
(
15
)
2.3
0.0023
P8 GC+1d culture
AGAAAGATGG
(
3
)
1.1
0.0011
P8 GC+SHH+1d culture
TGTGGCATAC
(
2
)
3.5
0.0035
P8 GC+SHH+1d culture
CTTTAAAAAA
(
15
)
1.2
0.0012
P1 cortex
AGAAAGATGG
(
3
)
9.1
0.0091
P1 cortex
CTTTAAAAAA
(
15
)
4.5
0.0045
Hypothalamus
CTTTAAAAAA
(
15
)
5.4
0.0054
Hypothalamus
AAGAAAACAA
(
9
)
1.8
0.0018
Hypothalamus
TGCTGCTTAA (
6
)
1.8
0.0018
Hypothalamus
TGTGGCATAC
(
2
)
1.8
0.0018
E12.5 retina
TGTGGCATAC
(
2
)
3.8
0.0038
E12.5 retina
AGAAAGATGG
(
3
)
1.9
0.0019
E12.5 retina
CTTTAAAAAA
(
15
)
1.9
0.0019
E14.5 retina
TGTGGCATAC
(
2
)
1.8
0.0018
E16.5 retina
TGTGGCATAC
(
2
)
5.4
0.0054
E16.5 retina
CTTTAAAAAA
(
15
)
3.6
0.0036
E16.5 retina
AAGAAAACAA
(
9
)
1.8
0.0018
E16.5 retina
AAGAAACCAA
(
5
)
1.8
0.0018
E18.5 retina
CTTTAAAAAA
(
15
)
27.3
0.0273
E18.5 retina
CAATTTCTTT
(
4
)
1.8
0.0018
E18.5 retina
TGCTGCTTAA (
6
)
1.8
0.0018
E18.5 retina
TGTGGCATAC
(
2
)
1.8
0.0018
P0.5 retina
AAAAGGGGAT (
5
)
2
0.002
P0.5 retina
AAGAAAACAA
(
9
)
2
0.002
P0.5 retina
CTTTAAAAAA
(
15
)
2
0.002
P0.5 retina
TGTGGCATAC
(
2
)
2
0.002
P2.5 retina
CTTTAAAAAA
(
15
)
10.6
0.0106
P2.5 retina
AAGAAAACAA
(
9
)
1.8
0.0018
P2.5 retina
AGAAAGATGG
(
3
)
1.8
0.0018
P2.5 retina
CAATTTCTTT
(
4
)
1.8
0.0018
P2.5 retina
TGCTGCTTAA (
6
)
1.8
0.0018
P2.5 retina
TGTGGCATAC
(
2
)
1.8
0.0018
P4.5 retina
CTTTAAAAAA
(
15
)
17.8
0.0178
P4.5 retina
TGTGGCATAC
(
2
)
4
0.004
P4.5 retina
AAGAAACCAA
(
5
)
2
0.002
P6.5 retina
CTTTAAAAAA
(
15
)
13.3
0.0133
P6.5 retina
TGTGGCATAC
(
2
)
5
0.005
P6.5 retina
AAGAAACCAA
(
5
)
1.7
0.0017
P10.5 crx- retina
TGTGGCATAC
(
2
)
3.7
0.0037
P10.5 crx- retina
CTTTAAAAAA
(
15
)
1.9
0.0019
P10.5 crx- retina
GTGCTGAAGA (
9
)
1.9
0.0019
P10.5 crx+ retina
CTTTAAAAAA
(
15
)
5.8
0.0058
P10.5 crx+ retina
AAAAGGGGAT (
5
)
1.9
0.0019
P10.5 crx+ retina
GTGCTGAAGA (
9
)
1.9
0.0019
P10.5 crx+ retina
TGTGGCATAC
(
2
)
1.9
0.0019
Adult retinal
CTTTAAAAAA
(
15
)
7.4
0.0074
ONL
AAAAGGGGAT (
5
)
1.9
0.0019
ONL
AAGAAAACAA
(
9
)
1.9
0.0019
ONL
CTTTAAAAAA
(
15
)
1.9
0.0019
