Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.87634
Cgn
cingulin
3
3 43.3 cM
70737
Gene Ontology
biological_process unknown
|
motor activity
|
myosin
|
tight junction
Human Homolog
CGN[cingulin]
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 29 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
TGGTTGCTGG (
369
)
68.5
0.0685
Cb medulloblastoma
TGGTTGCTGG (
369
)
113.3
0.1133
Cb medulloblastoma
ATTTAAAAGA
(
8
)
2.3
0.0023
P8 GC+1d culture
TGGTTGCTGG (
369
)
57.1
0.0571
P8 GC+SHH+1d culture
TGGTTGCTGG (
369
)
89
0.089
3T3 fibroblasts
TGGTTGCTGG (
369
)
220.8
0.2208
E15 cortex
TGGTTGCTGG (
369
)
277.1
0.2771
P1 cortex
TGGTTGCTGG (
369
)
86.4
0.0864
Hypothalamus
TGGTTGCTGG (
369
)
349.6
0.3496
E12.5 retina
TGGTTGCTGG (
369
)
157.7
0.1577
E12.5 retina
TGACAGTCAA (
2
)
11.3
0.0113
E12.5 retina
ATTTAAAAGA
(
8
)
1.9
0.0019
E14.5 retina
TGGTTGCTGG (
369
)
936.5
0.9365
E14.5 retina
TGACAGTCAA (
2
)
3.6
0.0036
E16.5 retina
TGGTTGCTGG (
369
)
767.9
0.7679
E18.5 retina
TGGTTGCTGG (
369
)
252.8
0.2528
P0.5 retina
TGGTTGCTGG (
369
)
190.4
0.1904
P2.5 retina
TGGTTGCTGG (
369
)
165.4
0.1654
P4.5 retina
TGGTTGCTGG (
369
)
150.6
0.1506
P4.5 retina
ATTTAAAAGA
(
8
)
4
0.004
P6.5 retina
TGGTTGCTGG (
369
)
156.7
0.1567
P6.5 retina
TGACAGTCAA (
2
)
1.7
0.0017
P10.5 crx- retina
TGGTTGCTGG (
369
)
280.5
0.2805
P10.5 crx- retina
ATTTAAAAGA
(
8
)
3.7
0.0037
P10.5 crx+ retina
TGGTTGCTGG (
369
)
101.9
0.1019
Adult retinal
TGGTTGCTGG (
369
)
214.8
0.2148
ONL
TGGTTGCTGG (
369
)
398.4
0.3984
ONL
TGACAGTCAA (
2
)
17.2
0.0172
ONL
TATGTAAAGC
(
2
)
5.7
0.0057
