Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.88349	3200001F09Rik	RIKEN cDNA 3200001F09 gene	4	4 65.71 cM	71817
Gene Ontology	cytoplasm | integral to membrane
Human Homolog	SMP1[small membrane protein 1]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 29 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GTCTAAAGAG (3) 3.3 0.0033 P8 Cb GC GTTTAAAGAG (3) 1.6 0.0016 P8 Cb GC TTCTTTTTTA (7) 1.6 0.0016 P8 GC+1d culture GTCTAAAGAG (3) 6.8 0.0068 P8 GC+SHH+1d culture GTCTAAAGAG (3) 2.3 0.0023 P8 GC+SHH+1d culture GTTTAAAGAG (3) 1.2 0.0012 P8 GC+SHH+1d culture TTCTTTTTTA (7) 1.2 0.0012 3T3 fibroblasts GTCTAAAGAG (3) 3.5 0.0035 P1 cortex GTCTAAAGAG (3) 4.5 0.0045 Hypothalamus GTCTAAAGAG (3) 5.4 0.0054 E12.5 retina GTCTAAAGAG (3) 3.8 0.0038 E12.5 retina TACCCCAGGA 1.9 0.0019 E16.5 retina GTCTAAAGAG (3) 1.8 0.0018 E16.5 retina GTTTAAAGAG (3) 1.8 0.0018 E18.5 retina GTCTAAAGAG (3) 1.8 0.0018 E18.5 retina TACCCCAGGA 1.8 0.0018 P2.5 retina GTCTAAAGAG (3) 3.5 0.0035 P2.5 retina TACCCCAGGA 1.8 0.0018 P4.5 retina GTCTAAAGAG (3) 5.9 0.0059 P4.5 retina TACCCCAGGA 2 0.002 P6.5 retina GTCTAAAGAG (3) 3.3 0.0033 P6.5 retina GTTTAAAGAG (3) 1.7 0.0017 P10.5 crx- retina GTCTAAAGAG (3) 7.4 0.0074 P10.5 crx+ retina GTCTAAAGAG (3) 7.7 0.0077 P10.5 crx+ retina TTCTTTTTTA (7) 1.9 0.0019 Adult retinal GTCTAAAGAG (3) 5.6 0.0056 Adult retinal TTCTTTTTTA (7) 1.9 0.0019 ONL GTCTAAAGAG (3) 3.8 0.0038 ONL GTTTAAAGAG (3) 1.9 0.0019