Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.88704	Ppp1r7	protein phosphatase 1, regulatory (inhibitor) subunit 7	1		66385
Human Homolog	PPP1R7[protein phosphatase 1, regulatory subunit 7]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 106 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC CCTTTAATCC (355) 52.2 0.0522 P8 Cb GC ACCTGGCAGT (2) 1.6 0.0016 P8 Cb GC CACACATACA (9) 1.6 0.0016 P8 Cb GC GTGGCGGCGG (4) 1.6 0.0016 Cb medulloblastoma CCTTTAATCC (355) 41.6 0.0416 Cb medulloblastoma CTGGCCTTAC 2.3 0.0023 Cb medulloblastoma GTGGCGGCGG (4) 2.3 0.0023 P8 GC+1d culture CCTTTAATCC (355) 32 0.032 P8 GC+1d culture TCTTTAATCC (30) 2.3 0.0023 P8 GC+1d culture TGAGTTCTGG (3) 2.3 0.0023 P8 GC+1d culture CACACATACA (9) 1.1 0.0011 P8 GC+1d culture CGCTACCACC (2) 1.1 0.0011 P8 GC+1d culture CTACTCTTAA 1.1 0.0011 P8 GC+1d culture CTGGCCTTAC 1.1 0.0011 P8 GC+SHH+1d culture CCTTTAATCC (355) 25.8 0.0258 P8 GC+SHH+1d culture CTGGCCTTAC 4.7 0.0047 P8 GC+SHH+1d culture TCTTTAATCC (30) 4.7 0.0047 P8 GC+SHH+1d culture TGAGTTCTGG (3) 4.7 0.0047 P8 GC+SHH+1d culture ACCTGGCAGT (2) 1.2 0.0012 P8 GC+SHH+1d culture CACACATACA (9) 1.2 0.0012 P8 GC+SHH+1d culture CGCTACCACC (2) 1.2 0.0012 P8 GC+SHH+1d culture GAGAGAAAAA (7) 1.2 0.0012 P8 GC+SHH+1d culture GTGGCGGCGG (4) 1.2 0.0012 3T3 fibroblasts CCTTTAATCC (355) 70.1 0.0701 3T3 fibroblasts CTGGCCTTAC 7 0.007 3T3 fibroblasts TCTTTAATCC (30) 7 0.007 E15 cortex CCTTTAATCC (355) 54.4 0.0544 E15 cortex GAGAGAAAAA (7) 4.9 0.0049 E15 cortex TCTTTAATCC (30) 4.9 0.0049 P1 cortex CCTTTAATCC (355) 154.5 0.1545 P1 cortex TCTTTAATCC (30) 9.1 0.0091 P1 cortex CTGGCCTTAC 4.5 0.0045 Hypothalamus CCTTTAATCC (355) 19.9 0.0199 Hypothalamus GTGGCGGCGG (4) 7.2 0.0072 Hypothalamus CTGGCCTTAC 3.6 0.0036 Hypothalamus TGAGTTCTGG (3) 3.6 0.0036 Hypothalamus ACCTGGCAGT (2) 1.8 0.0018 Hypothalamus CACACATACA (9) 1.8 0.0018 E12.5 retina CCTTTAATCC (355) 75.1 0.0751 E12.5 retina CACACATACA (9) 3.8 0.0038 E12.5 retina ACCTGGCAGT (2) 1.9 0.0019 E12.5 retina CTACTCTTAA 1.9 0.0019 E12.5 retina CTGGCCTTAC 1.9 0.0019 E12.5 retina TGAGTTCTGG (3) 1.9 0.0019 E14.5 retina CCTTTAATCC (355) 120.3 0.1203 E14.5 retina TCTTTAATCC (30) 21.9 0.0219 E14.5 retina CACACATACA (9) 3.6 0.0036 E14.5 retina ACCTGGCAGT (2) 1.8 0.0018 E14.5 retina CGCTACCACC (2) 1.8 0.0018 E14.5 retina TGAGTTCTGG (3) 1.8 0.0018 E16.5 retina CCTTTAATCC (355) 68.8 0.0688 E16.5 retina GTGGCGGCGG (4) 9.1 0.0091 E16.5 retina TCTTTAATCC (30) 9.1 0.0091 E16.5 retina CACACATACA (9) 3.6 0.0036 E16.5 retina ACCTGGCAGT (2) 1.8 0.0018 E16.5 retina AGCTGGCAGT 1.8 0.0018 E18.5 retina CCTTTAATCC (355) 23.6 0.0236 E18.5 retina ACCTGGCAGT (2) 1.8 0.0018 E18.5 retina GAGAGAATGC (7) 1.8 0.0018 E18.5 retina GTGGCGGCGG (4) 1.8 0.0018 E18.5 retina TCTTTAATCC (30) 1.8 0.0018 P0.5 retina CCTTTAATCC (355) 72.6 0.0726 P0.5 retina CACACATACA (9) 5.9 0.0059 P0.5 retina ACCTGGCAGT (2) 3.9 0.0039 P0.5 retina ACTCACAAGA 3.9 0.0039 P0.5 retina CTGGCCTTAC 2 0.002 P0.5 retina TCTTTAATCC (30) 2 0.002 P0.5 retina TGAGTTCTGG (3) 2 0.002 P2.5 retina CCTTTAATCC (355) 70.4 0.0704 P2.5 retina ACCTGGCAGT (2) 1.8 0.0018 P2.5 retina GTGGCGGCGG (4) 1.8 0.0018 P2.5 retina TCTTTAATCC (30) 1.8 0.0018 P2.5 retina TGAGTTCTGG (3) 1.8 0.0018 P4.5 retina CCTTTAATCC (355) 43.6 0.0436 P4.5 retina TCTTTAATCC (30) 9.9 0.0099 P4.5 retina CACACATACA (9) 4 0.004 P4.5 retina CGCTACCACC (2) 2 0.002 P4.5 retina CTACTCTTAA 2 0.002 P4.5 retina CTGGCCTTAC 2 0.002 P4.5 retina GAGAGAAAAA (7) 2 0.002 P4.5 retina GAGAGAATGC (7) 2 0.002 P4.5 retina TGAGTTCTGG (3) 2 0.002 P6.5 retina CCTTTAATCC (355) 70 0.07 P6.5 retina CACACATACA (9) 3.3 0.0033 P6.5 retina CTGGCCTTAC 3.3 0.0033 P6.5 retina TGAGTTCTGG (3) 1.7 0.0017 P10.5 crx- retina CCTTTAATCC (355) 63.2 0.0632 P10.5 crx- retina CACACATACA (9) 1.9 0.0019 P10.5 crx- retina TCTTTAATCC (30) 1.9 0.0019 P10.5 crx- retina TGAGTTCTGG (3) 1.9 0.0019 P10.5 crx+ retina CCTTTAATCC (355) 38.4 0.0384 P10.5 crx+ retina GTGGCGGCGG (4) 3.8 0.0038 P10.5 crx+ retina ACTCACAAGA 1.9 0.0019 P10.5 crx+ retina CACACATACA (9) 1.9 0.0019 P10.5 crx+ retina TCTTTAATCC (30) 1.9 0.0019 Adult retinal CCTTTAATCC (355) 129.6 0.1296 Adult retinal TCTTTAATCC (30) 7.4 0.0074 Adult retinal AGCTGGCAGT 3.7 0.0037 Adult retinal CACACATACA (9) 1.9 0.0019 Adult retinal CTGGCCTTAC 1.9 0.0019 Adult retinal GAGAGAAAAA (7) 1.9 0.0019 Adult retinal TGAGTTCTGG (3) 1.9 0.0019 ONL CCTTTAATCC (355) 84.3 0.0843 ONL TCTTTAATCC (30) 13.4 0.0134 ONL CACACATACA (9) 1.9 0.0019 ONL GAGAGAATGC (7) 1.9 0.0019