Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.9001	D11Ertd80e	DNA segment, Chr 11, ERATO Doi 80, expressed	11	11 45.0 cM	52473
Mm.9001	5830445D09Rik	RIKEN cDNA 5830445D09 gene	11		76052
Mm.9001	Nlk	nemo like kinase	11	11 B5	18099
Gene Ontology	ATP binding | autophosphorylation | magnesium ion binding | MAP kinase activity | nucleus | protein amino acid phosphorylation | protein kinase activity | protein kinase activity | protein serine/threonine kinase activity | protein-tyrosine kinase activity | regulation of transcription, DNA-dependent | transferase activity
Human Homolog	NLK[nemo like kinase]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

Total 10 In Situ Hybridization Images

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SAGE Tags

Total 69 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GGCAGGAGAG (8) 3.3 0.0033 P8 Cb GC GATGCTGTGT (7) 1.6 0.0016 Cb medulloblastoma GGCAGGAGAG (8) 11.6 0.0116 Cb medulloblastoma GATGCTGTGT (7) 2.3 0.0023 Cb medulloblastoma TCAAATGTGT (4) 2.3 0.0023 P8 GC+1d culture GGCAGGAGAG (8) 13.7 0.0137 P8 GC+1d culture TGAACAATCT (3) 1.1 0.0011 P8 GC+SHH+1d culture GGCAGGAGAG (8) 8.2 0.0082 3T3 fibroblasts GATGCTGTGT (7) 3.5 0.0035 3T3 fibroblasts GGCAGGAGAG (8) 3.5 0.0035 E15 cortex GGCAGGAGAG (8) 4.9 0.0049 P1 cortex GGCAGGAGAG (8) 9.1 0.0091 P1 cortex GGCAGGAGGG (6) 9.1 0.0091 Hypothalamus GGCAGGAGAG (8) 9.1 0.0091 Hypothalamus GAAGTTAAAA (5) 3.6 0.0036 Hypothalamus TGAACAATCT (3) 1.8 0.0018 E12.5 retina GGCAGGAGAG (8) 16.9 0.0169 E12.5 retina GGCAGGAGGG (6) 1.9 0.0019 E12.5 retina TCAAATGTGT (4) 1.9 0.0019 E12.5 retina TGAACAATCT (3) 1.9 0.0019 E14.5 retina GGCAGGAGAG (8) 9.1 0.0091 E14.5 retina GGCAGGAGGG (6) 3.6 0.0036 E14.5 retina GCCTGTGCAT (7) 1.8 0.0018 E14.5 retina TCAAATGTGT (4) 1.8 0.0018 E16.5 retina GGCAGGAGGG (6) 5.4 0.0054 E16.5 retina GGCAGGAGAG (8) 3.6 0.0036 E16.5 retina TGAACAATCT (3) 3.6 0.0036 E16.5 retina GAAGTTAAAA (5) 1.8 0.0018 E16.5 retina GTTAAAGAAT (3) 1.8 0.0018 E18.5 retina GGCAGGAGAG (8) 23.6 0.0236 E18.5 retina GGCAGGAGGG (6) 3.6 0.0036 E18.5 retina GAAGTTAAAA (5) 1.8 0.0018 E18.5 retina TGAACAATCT (3) 1.8 0.0018 P0.5 retina GGCAGGAGAG (8) 9.8 0.0098 P0.5 retina GCCTGTGCAT (7) 3.9 0.0039 P0.5 retina TGAACAATCT (3) 2 0.002 P2.5 retina GGCAGGAGAG (8) 12.3 0.0123 P2.5 retina GGCAGGAGGG (6) 8.8 0.0088 P2.5 retina TGAACAATCT (3) 5.3 0.0053 P2.5 retina GCCTGTGCAT (7) 1.8 0.0018 P2.5 retina TCAAATGTGT (4) 1.8 0.0018 P4.5 retina GGCAGGAGAG (8) 11.9 0.0119 P4.5 retina TCAAATGTGT (4) 4 0.004 P4.5 retina GAAGTTAAAA (5) 2 0.002 P4.5 retina GCCTGTGCAT (7) 2 0.002 P4.5 retina GGCAGGAGGG (6) 2 0.002 P4.5 retina GTTAAAGAAT (3) 2 0.002 P4.5 retina TGAACAATCT (3) 2 0.002 P6.5 retina GGCAGGAGAG (8) 13.3 0.0133 P6.5 retina TGAACAATCT (3) 6.7 0.0067 P6.5 retina TCAAATGTGT (4) 3.3 0.0033 P6.5 retina GGCAGGAGGG (6) 1.7 0.0017 P10.5 crx- retina GGCAGGAGAG (8) 20.4 0.0204 P10.5 crx- retina TCAAATGTGT (4) 5.6 0.0056 P10.5 crx- retina GAAGTTAAAA (5) 1.9 0.0019 P10.5 crx- retina GGCAGGAGGG (6) 1.9 0.0019 P10.5 crx+ retina GGCAGGAGAG (8) 23.1 0.0231 P10.5 crx+ retina GGCAGGAGGG (6) 13.5 0.0135 P10.5 crx+ retina TCAAATGTGT (4) 7.7 0.0077 P10.5 crx+ retina TGAACAATCT (3) 3.8 0.0038 Adult retinal GGCAGGAGAG (8) 13 0.013 Adult retinal GGCAGGAGGG (6) 1.9 0.0019 Adult retinal TCAAATGTGT (4) 1.9 0.0019 Adult retinal TGAACAATCT (3) 1.9 0.0019 ONL GGCAGGAGAG (8) 11.5 0.0115 ONL TGAACAATCT (3) 5.7 0.0057 ONL GGCAGGAGGG (6) 1.9 0.0019 ONL GTTAAAGAAT (3) 1.9 0.0019 ONL TCAAATGTGT (4) 1.9 0.0019