Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.9213	Esr1	estrogen receptor 1 (alpha)	10	10 A1 (10 12.0 cM)	13982
Gene Ontology	cytoplasm | DNA binding | ligand-dependent nuclear receptor activity | nucleus | receptor activity | regulation of transcription, DNA-dependent | steroid binding | steroid hormone receptor activity | transcription factor activity
Human Homolog	ESR1[estrogen receptor 1]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

Total 5 In Situ Hybridization Images

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SAGE Tags

Total 35 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC CCCCAGCCAG (9) 112.6 0.1126 Cb medulloblastoma CCCCAGCCAG (9) 78.6 0.0786 Cb medulloblastoma TCAATAAAAT (2) 2.3 0.0023 P8 GC+1d culture CCCCAGCCAG (9) 151.8 0.1518 P8 GC+1d culture TTCCCACCTT (6) 1.1 0.0011 P8 GC+SHH+1d culture CCCCAGCCAG (9) 139.3 0.1393 P8 GC+SHH+1d culture TCAATAAAAT (2) 1.2 0.0012 P8 GC+SHH+1d culture TTCCCACCTT (6) 1.2 0.0012 3T3 fibroblasts CCCCAGCCAG (9) 308.4 0.3084 E15 cortex CCCCAGCCAG (9) 188 0.188 P1 cortex CCCCAGCCAG (9) 72.7 0.0727 Hypothalamus CCCCAGCCAG (9) 74.3 0.0743 Hypothalamus TGACTTTATT (4) 1.8 0.0018 E12.5 retina CCCCAGCCAG (9) 255.3 0.2553 E12.5 retina TTCCCACCTT (6) 1.9 0.0019 E14.5 retina CCCCAGCCAG (9) 235 0.235 E14.5 retina TGACTTTATT (4) 1.8 0.0018 E16.5 retina CCCCAGCCAG (9) 268.1 0.2681 E18.5 retina CCCCAGCCAG (9) 174.6 0.1746 E18.5 retina TTCCCACCTT (6) 3.6 0.0036 P0.5 retina CCCCAGCCAG (9) 176.6 0.1766 P2.5 retina CCCCAGCCAG (9) 126.7 0.1267 P2.5 retina TTCCCACCTT (6) 1.8 0.0018 P4.5 retina CCCCAGCCAG (9) 144.6 0.1446 P6.5 retina CCCCAGCCAG (9) 106.7 0.1067 P6.5 retina TTCCCACCTT (6) 3.3 0.0033 P6.5 retina TCAATAAAAT (2) 1.7 0.0017 P10.5 crx- retina CCCCAGCCAG (9) 87.3 0.0873 P10.5 crx+ retina CCCCAGCCAG (9) 82.7 0.0827 P10.5 crx+ retina TCAATAAAAT (2) 1.9 0.0019 P10.5 crx+ retina TTCCCACCTT (6) 1.9 0.0019 Adult retinal CCCCAGCCAG (9) 74.1 0.0741 Adult retinal TTCCCACCTT (6) 1.9 0.0019 ONL CCCCAGCCAG (9) 30.6 0.0306 ONL TTCCCACCTT (6) 3.8 0.0038